Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01100 AGAAACACAGAGAGGGAAATGGTGGTCCGGACTGCGGAGGTATGTATTAAAGTGATTTATCTGTTGTGGTTAACGCAGGGAATAGTTACTCAAGAATTATCATCAACGGCGAAGCCTGGTTGTGAAAACTTTTGCGGAAATGTCGAAATACCGTACCCTTTTGGTATGGGAAGCAATTGCTCCATGGGAGAGTGGTTTTCCATTTACTGCAACCGTTCCACCACTCCTTCGAAGCCGTTTCTGAACAAAATTCAGAGTCAAGTAATGAATATTTCTCTGGGCGGAACTATTTCTATCAATTTTCCGTTAACTTCAAGCTGCAACTCAACTGTTCAGTCTGTAAACTTGACCGGAAGCTCTTTTGTGTTCTCCCAATTTCACAACAAATTTATTGGGGTGGGCTGTAATAACCTAGCTTTAATGGTTTTCAATACTTCCGGTCAGAATACTACAAGTACAATTGGTGGGTGTCTGTCTCTTTGCAATAATAAGAGGCTTAGCGATGGAGCTTACACCTGCAATGGAATCGGTTGTTGCCAAACAACTATCCCTACTGCTCTCCAGGTGTTCGACGTAAATCTCACGACAATACAACGCGAAGAAGAAGAAGAGGGTTGCAAATATGGATTCGTGGTGAATCAAACCTGGTTTAATCCCAAGATTTCTCGTTTTTCAAACTTGAAAAATCTGAAATTCGTGCCGGCTGTCCTTGAATGGAGTATCCCAGAAGACATGTTTAGTTTTCTACCGAGAGTTTCTAATTCAACTAAGTGTCAAAATCCTTATCGCTTCAACTCATCGTCTTTTGGGATTCCAAATTCATTCAGATCTTGTTATTGCAAACTAGGCTACGAAGGAAATCCTTATCTTTCTAATGGATGTCAGGATGTGGATGAATGCAAGAATCAAACCCGGTTTTATAGGCTCAGTTTTCCTGGTACAACTTTTTTTTGCATAAATACTGTTGGGAGTTATGAGGTTTTTATTAGAAAGAAGCTTACTGATCGAACTCAGGCTATTGGCATAGGTAAATATGCTTCTCTTTCTCTTTCTGGACTCTTAAAAACACTTATTCTTTCTCGTGTCGGGGCTGCTTCCGGAGTGTTGATTCTACTCTTCGGAGGGTGGGGGCTACACAAAGAAGTTAAGAGAAGGAAGGAAGCTAAACAAAAGGAAAAGTTCTTCAAGAGAAATGGAGGATTGTTGTTGAAGCAGCAACTAGCAGAAGGGGAATTCAATGTCGAGAAAACCAAACTATTTGATTCGAAGGAGCTCGAGAAGGCCACAGATCGGTTCAATGCAAATCGTATTTTGGGTCAAGGAGGGCAGGGTACTGTCTATAAAGGAATGCTAGCCGATGGGAAGATAGTGGCCGTGAAGAAATCAAAGAGGGTCGACGAAAGCAAGATAGAGGAGTTCGTCAATGAAGTCGTGATTTTGTCGCAGATCAATCACAGAAATATAGTGAAGCTGATGGGATGTTGTTTGGAGACTGAGGTTCCATTACTAGTCTATGAGTTCATTCCAAATGGAACACTTTTTAACTATCTCCATCACCCAAATGAAGATGAGCTTCCTCTAACCTGGGATATGAGGATGAGAATTGCCACTGAAATTGCAGGCGCCCTTTTCTACTTGCACTCTGCAGCCTCCCAGCCTATCTATCATAGAGACATAAAGTCCTCCAACATTCTTTTGGATGAAAAATATCGGGCCAAAATAGCCGACTTCGGCACCTCAAGGTCGGTTGCCATCGACCAAACCCACCTCACCACTCAAGTGCAGGGCACTTTCGGCTACTTGGATCCCGAGTTCTTCCAGTCCAGCCAATTCACCGAAAAGAGTGACGTTTACAGTTTTGGGGTCGTTTTGGTCGAGCTTTTGACCGGGCAAGAGCCGATTAGTAAAGAGAGATTGATGGAAGGAACAAGTTTGGCCTTTTATTTCATTGATTCTATGAATGGAAACACACTTTTCGACATTCTTGATGACAGAGTTATCAAGGAAGGCAAGCAAGAAGATATCATTGTAGTCGCAAACCTTGCAAAAAGATGCTTGAGCTTGAACGGAAGAGCTCGACCAACGATGAAGGAAGTTGTCGTGGAGCTCGATTCGGTCCAGATGACGCAAAAAGCACATGTCATTGGAAATACTGGAGAGGGGGATGAATTTGTGATGACAGAAGAAACTCTGCGTTGGGAGGAAGACATTTCTATGTCAACAAGGTCTGATTTGAACAGTGATACTTTTAGTCTGTTACCTTAA 2265 42.38 RNTEREMVVRTAEVCIKVIYLLWLTQGIVTQELSSTAKPGCENFCGNVEIPYPFGMGSNCSMGEWFSIYCNRSTTPSKPFLNKIQSQVMNISLGGTISINFPLTSSCNSTVQSVNLTGSSFVFSQFHNKFIGVGCNNLALMVFNTSGQNTTSTIGGCLSLCNNKRLSDGAYTCNGIGCCQTTIPTALQVFDVNLTTIQREEEEEGCKYGFVVNQTWFNPKISRFSNLKNLKFVPAVLEWSIPEDMFSFLPRVSNSTKCQNPYRFNSSSFGIPNSFRSCYCKLGYEGNPYLSNGCQDVDECKNQTRFYRLSFPGTTFFCINTVGSYEVFIRKKLTDRTQAIGIGKYASLSLSGLLKTLILSRVGAASGVLILLFGGWGLHKEVKRRKEAKQKEKFFKRNGGLLLKQQLAEGEFNVEKTKLFDSKELEKATDRFNANRILGQGGQGTVYKGMLADGKIVAVKKSKRVDESKIEEFVNEVVILSQINHRNIVKLMGCCLETEVPLLVYEFIPNGTLFNYLHHPNEDELPLTWDMRMRIATEIAGALFYLHSAASQPIYHRDIKSSNILLDEKYRAKIADFGTSRSVAIDQTHLTTQVQGTFGYLDPEFFQSSQFTEKSDVYSFGVVLVELLTGQEPISKERLMEGTSLAFYFIDSMNGNTLFDILDDRVIKEGKQEDIIVVANLAKRCLSLNGRARPTMKEVVVELDSVQMTQKAHVIGNTGEGDEFVMTEETLRWEEDISMSTRSDLNSDTFSLLP 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 44030119 44032640 + Bma026316.1 Bma07g01100 86237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01100 754 Pfam Protein kinase domain 433 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01100 754 SMART serkin_6 432 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01100 754 ProSiteProfiles Protein kinase domain profile. 432 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01100 754 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 720 IPR045274 GO:0007166
Bma07g01100 754 Pfam Wall-associated kinase 172 281 IPR013695 GO:0004674|GO:0016021
Bma07g01100 754 CDD STKc_IRAK 438 704 - -
Bma07g01100 754 Gene3D Phosphorylase Kinase; domain 1 403 507 - -
Bma07g01100 754 Gene3D Laminin 251 338 - -
Bma07g01100 754 Pfam Wall-associated receptor kinase galacturonan-binding 41 99 IPR025287 GO:0030247
Bma07g01100 754 PANTHER - 29 720 - -
Bma07g01100 754 Gene3D Transferase(Phosphotransferase) domain 1 508 726 - -
Bma07g01100 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Bma07g01100 754 SUPERFAMILY Protein kinase-like (PK-like) 416 703 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00198 Bma-Chr2:2113518 Bma07g01100 Bma-Chr7:44030119 1.31E-155 dispersed
Bma07g01077 Bma-Chr7:43295906 Bma07g01100 Bma-Chr7:44030119 1.29E-74 dispersed
Bma07g01078 Bma-Chr7:43354142 Bma07g01100 Bma-Chr7:44030119 0 dispersed
Bma07g01100 Bma-Chr7:44030119 Bma14g00234 Bma-Chr14:2834272 0 dispersed
Bma07g01100 Bma-Chr7:44030119 Bma02g01002 Bma-Chr2:50829937 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66625 PF00069 Pkinase 2.90E-51 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01100 - - qsu:111985753 732.25