Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01122 ATGTGGGTATCACTGGCCGCAGCTTCCTTCTTCTTCGCTGTCGGTCTGCTCGTCATTCTGAGATGGGGATGGAGGATTCTGAACTGGGTTTGGCTGAACCCCAAGAAGCAGGAAAAGGAGATGAGAAAGCAAGGGTTTGCTGGAAATCCTTATCGACTTCTTTTTGGAGATTTAAAGGATGATTCGGTGCTGATGAAGAAAGCTTCCTCCCACCCCATGAACTTCTCCAACCACATTATTCCGCACGTTGCCCCTTTTCTTCATCAAATTGTCACAAATTTTGGTTTGAATTCTTTTACTTGGATTGGACCTGTAATAAGAGTTCTGATTTCAGACCCAGAACTGGTGAAGATCATCTTCGCCGATTTAAATGAATTTGAGAAACCAGTTCCGAGTAATCCTCTTTCTAAGTTCTTGGTGACTGGCTTTGCTTTCTATGAAGGAGAGAAATGGGCTAAACACAGAAAGATAATCAACCCATCATTTCACATGGAAAAATTGAAGAACATGTTACCGGCATTCGAACAGAGCTGCAATGAGGTGATTATTAAATGGGAAAGGATGGTCTCCGAAGGGAATTCATGTGAGGTTGACGTGTGGCCTGACCTACAAAACATAACATGCGATGCAATTGCTCGAACGGCTTTCAGTAGCAGTTTCGAGGAAGGAAGAAAAATATTTAAGCTTCTGAAAGAGTTATCTGTTTTAGTGGTACAGATTCTACGAACAATTTATATTCCTGGACGGAGGTTCTTACCCACAAAAACCAACAGAAGAATAAAAGCAACGGAGGCAGAACTACAAGGTTTGCTAAAGGGTTTGATAAGAAAAAGAGAGAAAGCAATGGAGGGAGGGGAAGAGCCAAAGGATGACTTGCTGGGTATTCTTCTTGAATCAAACCATAATGAAATAAAAAAACATGGAAATAACAAGAGCAGCGGATTGAGCATGGAAGATGTCGTCAATGAGTGCAAGCTTTTTTACCTTGCTGGGCAAGAAACCACATCTGATCTTCTTGTTTGGACAATGGTCTTGTTGGGTGATAATCAACAATGGCAGCAGAGAGCCAGAGACGAGGTCTTTCAAGTTTTTGGTAAAAACAAGCCTACTTTTGATGGCTTGAGTCACTTAAAAGTTGTAACTATGATCTTGTATGAAGCTCTAAGGCTATATCCTCCGGTGCCGATATTTACTCGAAAAGTTCATGAAGAGACTAAACTTGGGGACGTGACATTACCGGCAGGTGCGTTGATGCTAATACCATCCATCTTTATTCAACACGATGTGAAAATATGGGGCGACGACGCACAAGATTTCAACCCAGAAAGATTTTCCGAAGGAATTTCTAAGGTGACAAAGAATCAAGTTGTGTTCTTTCCATTCGGGTGGGGTCCTCGGATATGCATTGGCCAGAATTTTGCCATGATAGAGGCGAAGTTGGTTTTGTCGATGATTCTTCAACGCTTCTCGTTTGAGCTCTCTCTATCTTACACTCACGCTCCTGTCTTCTTACTGACTCTTCAACCGCAACATGGAGCTCATATCATCCTTCACAAACTTCAAGATTGA 1569 42.13 MWVSLAAASFFFAVGLLVILRWGWRILNWVWLNPKKQEKEMRKQGFAGNPYRLLFGDLKDDSVLMKKASSHPMNFSNHIIPHVAPFLHQIVTNFGLNSFTWIGPVIRVLISDPELVKIIFADLNEFEKPVPSNPLSKFLVTGFAFYEGEKWAKHRKIINPSFHMEKLKNMLPAFEQSCNEVIIKWERMVSEGNSCEVDVWPDLQNITCDAIARTAFSSSFEEGRKIFKLLKELSVLVVQILRTIYIPGRRFLPTKTNRRIKATEAELQGLLKGLIRKREKAMEGGEEPKDDLLGILLESNHNEIKKHGNNKSSGLSMEDVVNECKLFYLAGQETTSDLLVWTMVLLGDNQQWQQRARDEVFQVFGKNKPTFDGLSHLKVVTMILYEALRLYPPVPIFTRKVHEETKLGDVTLPAGALMLIPSIFIQHDVKIWGDDAQDFNPERFSEGISKVTKNQVVFFPFGWGPRICIGQNFAMIEAKLVLSMILQRFSFELSLSYTHAPVFLLTLQPQHGAHIILHKLQD 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 44850186 44853498 + Bma026343.5 Bma07g01122 86259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01122 522 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Bma07g01122 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 517 - -
Bma07g01122 522 PANTHER CYTOCHROME P450-RELATED 13 517 - -
Bma07g01122 522 Gene3D Cytochrome P450 74 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 SUPERFAMILY Cytochrome P450 80 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01122 522 Pfam Cytochrome P450 101 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01122 Bma-Chr7:44850186 Bma07g01124 Bma-Chr7:44997509 0 dispersed
Bma07g01122 Bma-Chr7:44850186 Bma07g01123 Bma-Chr7:44922043 0 tandem
Bma01g00422 Bma-Chr1:3526355 Bma07g01122 Bma-Chr7:44850186 2.24E-137 transposed
Bma01g01121 Bma-Chr1:11849613 Bma07g01122 Bma-Chr7:44850186 9.13E-110 transposed
Bma04g00114 Bma-Chr4:901436 Bma07g01122 Bma-Chr7:44850186 2.74E-160 transposed
Bma11g00605 Bma-Chr11:9026331 Bma07g01122 Bma-Chr7:44850186 3.76E-156 transposed
Bma13g00215 Bma-Chr13:3133433 Bma07g01122 Bma-Chr7:44850186 3.58E-104 transposed
Bma14g00216 Bma-Chr14:2645097 Bma07g01122 Bma-Chr7:44850186 8.28E-50 wgd
Bma14g00276 Bma-Chr14:3375597 Bma07g01122 Bma-Chr7:44850186 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01122 - - qsu:112016053 672.93