Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01130 ATGTACTTCCAACTTTTTCTCTTCTTGTGTGCTGCCCTTCTTCCTCTTCTTCTTCATAGTCAGAAATTCATTGTTCTTGCTTCTGCAATAACTAGTGCTTCTAATGCAAAGGATTCCACTGATGCGAGTTCTTTGTTGGCCTTTAAATTAATGGTTGAAGATGATCCTCTTGATGCTCTTCGTTCGTGGAATGATTCTCTCCATTTTTGCAAATGGGAAGGAATCACATGTGGTCGTCGCCATCAACGAGTCATCTTTTTATACCTCTCTTCTAAAAGCTTGGTGGGTGCTCTGTCTCCTTCGTTGGGAAACCTCACTTTCCTGAGATATTTGAATCTGGAAAACAATACCTTTCATGGCAGAATACCCGAGGAGATCGGTCGTTTAACAAGGCTGCAAAGTTTGTTCTTAAGAAACAATTCATTCGAAGGAGAGATTCCTAGAAATCTTTCTCGTTGCTTCAATCTCATTGATCTCCGTCTTAGTTGGAACAAGTTGGTTGGAATTTTTCCGATGCAGATATTATCTATTTATGGACTTAAACGTCTTATATTTGATTATAACAACATTAGAGGAGCCATACCTTCAGCCATAGCAAATCTAACTTCTTTGGAAATTCTTTCGATTGTTAGTAACCTATTAGAGGGAAGCATACCCGCTTCAATAGGTAGTTTGAAAAACTTGAAACGTTTGACACTCAGTCTCAATGGATTTTCAGGTATCTTACCCTCATCAATCTACAACCTTTCCTTGGTCGAAATGATCTCTCTTACTCAAAATCAACTTCATGGAAGCCTTTCACCAAATATAGGTCTTTCTTTTCCTAACCTCAAACAATTCCTAGTGGCTGAAAACAATTTTACTGGTCCCATTCCTCTGTCTTTTACCAATGCTTCCAACCTCGTGGATCTTCAGCTGTGTTCCAACAACTTCTCTGGCAAGATGGGTGTTGATTTTGGAAAAATGAAAAATTTGTCAACGCTGCTTTTGGATTATAATGATCTTGGAAATGGGGATTCTAACGATTTGAATTTTCTCAATTCATTGGCCAATTGTAGTCACTTATTAAGACTAACTCTAAACGACAATGGCTTTGGAGGCGTTATTCCTAGTTCACTTGCCAACCTATCTACTCAACTCACAATGTTGGGATTGGGAAGAAATCGATTGTTTGGTGAAATACCGTCAGGAATCAGAAATCTTGCGAGCTTAAATGTGCTGATCTTGTCATTGAATGATTTTCAAGGAAACTTGCCCAACGAAATAGGCAAACTTCAAAACTTAAGACGTCTTGCTGTAGCATGGAACACCCTTACAGGAGAAATTCCAGAGACTCTTGGAAACTTAACGAGATTGATTTCCCTTGACTTGCAGAATAACAAATTTTATGGTGCTATTCCTGCGAGTATCGGAAATTGCAACCAGTTAACATTCTTGTCGTTTCGTAATAATAGCCTTAGTGGCGTCATTCCTAAGCAAGTATTTTCCCTTACGCGAGTTGGACGATTATTGGATTTATCCCAAAACAAATTCAGTGGAGAATTACCTCCCGAAGTTGGTAATTTAAAAACTATGAGAGCTTTACACTTATTCGATAATGATTTTTCAGGAACACTTCCCAGTGAATTAGGGAGTTGCGTAAGCCTAGAATATCTCATCATGCAAGGCAACAACTTCCACGGACCCATTCCTTTAAGCTTTAGTTCATTACAAGGCATTAGAGTACTTGACCTTTCTTCCAACAACCTATCAGGCCAAATTCCAAACTACTTTTCTAAATTTTCCATGAGTTTATTAAATTTATCCTTCAATAATTTTGATGGCAAGGTTCCGATTGCCGGAGTTTTTTCAAATGCATCAACCGTCTCATTGCTTGGAAATATCAAACTCTGTGGTGGTGCATCGTTTCTAAACCTACCCATTTGCCTCAATGAAGCAAGGAAAATGCCTCAATTGACCCGCAAGCTCAAGATTATTATATCAGTATGCACTTCTCTGTTTGTATTAGTTTCAGTATCATGCTTACTCTTCTTTTTGGTTGGAAAGAAAATGAGAAGGAAACCAAAAGAGAACCAATTGGCCTCAAAACCCTCTCTTTTCATGGAAGTGTCATATGGTGATCTACTCAAAGCAACCAATAACTTTTCTTTTGATAATTTGATTGGAAATGGATATTTTAGCTCAGTCTATAAAGGAGTTCTTGAACAAATAGGCCAAACCGTAGCCGTTAAAGTTCTCAACCTTCAGCTTCGTGGAGCAGTCAAGAGTTTCACAGCTGAGTGTGAAGCTTTGAGGAGCATTCGTCATAGAAATCTACTGAAGACGATAACTTCATGCTCCACCGTTGATTTTAAGGGAAATGATTTCAAAGCTATTGTGTATGAGTTCATGCCTAATGGAAATTTAGACTCGTGGTTGCATGCTGAAAGCCAAGACCTAAATGACGGACGATGTCTAAACCTTCTTCAACGAGTAAATATAGCCATTGATGTTGCTGTAGCGCTCGATTATCTTCACCATCGTTGTCATATTCCAGTTGTTCATTGTGATTTAAAGCCATCCAACATTCTTCTCGATGAAAGTATGACTGCACATGTTGGAGATTTCGGACTTGCGAAACTTCTTACAAATTACACCAAAGTTAGTGAATCTAGCTCTATTGCCATTCGAGGAACGATTGGATATGTTGCTCCAGAATATGGACAAGGAAGTGATGTTTCAACTAAGGGCGACACGTATAGCTATGGAATATTATTGTTGGAAATGATAACAGGAAAACGACCAACTGATATGATGTTCGTAGGAGAACTCAACCTACATTCTTACGTTGATATGGCTTTGTCGGGTCAAGTAATCAACATTGTCGATAGCGGTCTCCTATCTTTCATGAGACATACTGGTCATAAGACGATGAACTGTTTGGTTTCACTGTTAAAGCTTGGTCTGGCATGTTCCATGGAGTCTCCAGGTGATCGAATGGTTATCGCTAATGTTATGGTGGAGTTGCAGATGATTAAAACTGTTGTGCTCTCTTTGGATCATCAAAATTGA 3051 38.77 MYFQLFLFLCAALLPLLLHSQKFIVLASAITSASNAKDSTDASSLLAFKLMVEDDPLDALRSWNDSLHFCKWEGITCGRRHQRVIFLYLSSKSLVGALSPSLGNLTFLRYLNLENNTFHGRIPEEIGRLTRLQSLFLRNNSFEGEIPRNLSRCFNLIDLRLSWNKLVGIFPMQILSIYGLKRLIFDYNNIRGAIPSAIANLTSLEILSIVSNLLEGSIPASIGSLKNLKRLTLSLNGFSGILPSSIYNLSLVEMISLTQNQLHGSLSPNIGLSFPNLKQFLVAENNFTGPIPLSFTNASNLVDLQLCSNNFSGKMGVDFGKMKNLSTLLLDYNDLGNGDSNDLNFLNSLANCSHLLRLTLNDNGFGGVIPSSLANLSTQLTMLGLGRNRLFGEIPSGIRNLASLNVLILSLNDFQGNLPNEIGKLQNLRRLAVAWNTLTGEIPETLGNLTRLISLDLQNNKFYGAIPASIGNCNQLTFLSFRNNSLSGVIPKQVFSLTRVGRLLDLSQNKFSGELPPEVGNLKTMRALHLFDNDFSGTLPSELGSCVSLEYLIMQGNNFHGPIPLSFSSLQGIRVLDLSSNNLSGQIPNYFSKFSMSLLNLSFNNFDGKVPIAGVFSNASTVSLLGNIKLCGGASFLNLPICLNEARKMPQLTRKLKIIISVCTSLFVLVSVSCLLFFLVGKKMRRKPKENQLASKPSLFMEVSYGDLLKATNNFSFDNLIGNGYFSSVYKGVLEQIGQTVAVKVLNLQLRGAVKSFTAECEALRSIRHRNLLKTITSCSTVDFKGNDFKAIVYEFMPNGNLDSWLHAESQDLNDGRCLNLLQRVNIAIDVAVALDYLHHRCHIPVVHCDLKPSNILLDESMTAHVGDFGLAKLLTNYTKVSESSSIAIRGTIGYVAPEYGQGSDVSTKGDTYSYGILLLEMITGKRPTDMMFVGELNLHSYVDMALSGQVINIVDSGLLSFMRHTGHKTMNCLVSLLKLGLACSMESPGDRMVIANVMVELQMIKTVVLSLDHQN 1016
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 45073523 45076658 + Bma026353.1 Bma07g01130 86267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01130 1016 SMART serkin_6 715 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01130 1016 Gene3D Phosphorylase Kinase; domain 1 679 796 - -
Bma07g01130 1016 SUPERFAMILY Protein kinase-like (PK-like) 693 1004 IPR011009 -
Bma07g01130 1016 Gene3D Ribonuclease Inhibitor 337 642 IPR032675 -
Bma07g01130 1016 Gene3D Ribonuclease Inhibitor 197 336 IPR032675 -
Bma07g01130 1016 Gene3D Ribonuclease Inhibitor 38 196 IPR032675 -
Bma07g01130 1016 SUPERFAMILY L domain-like 40 335 - -
Bma07g01130 1016 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Bma07g01130 1016 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 1010 - -
Bma07g01130 1016 SMART LRR_typ_2 129 153 IPR003591 -
Bma07g01130 1016 SMART LRR_typ_2 401 425 IPR003591 -
Bma07g01130 1016 SMART LRR_typ_2 570 593 IPR003591 -
Bma07g01130 1016 SMART LRR_typ_2 449 473 IPR003591 -
Bma07g01130 1016 SMART LRR_typ_2 497 522 IPR003591 -
Bma07g01130 1016 SMART LRR_typ_2 225 248 IPR003591 -
Bma07g01130 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Bma07g01130 1016 SUPERFAMILY L domain-like 378 632 - -
Bma07g01130 1016 Pfam Protein kinase domain 717 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01130 1016 Gene3D Transferase(Phosphotransferase) domain 1 797 1013 - -
Bma07g01130 1016 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 11 1010 - -
Bma07g01130 1016 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Bma07g01130 1016 ProSiteProfiles Protein kinase domain profile. 715 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01130 1016 Pfam Mycoplasma MFS transporter 629 730 IPR011699 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01318 Bma-Chr4:44828602 Bma07g01130 Bma-Chr7:45073523 0 dispersed
Bma07g00730 Bma-Chr7:19053510 Bma07g01130 Bma-Chr7:45073523 2.45E-163 dispersed
Bma07g01108 Bma-Chr7:44283320 Bma07g01130 Bma-Chr7:45073523 2.41E-29 dispersed
Bma07g01113 Bma-Chr7:44427910 Bma07g01130 Bma-Chr7:45073523 1.37E-20 dispersed
Bma07g01130 Bma-Chr7:45073523 Bma10g00842 Bma-Chr10:15020812 3.08E-175 dispersed
Bma11g00648 Bma-Chr11:11369065 Bma07g01130 Bma-Chr7:45073523 4.40E-164 dispersed
Bma07g01130 Bma-Chr7:45073523 Bma07g01135 Bma-Chr7:45466592 6.99E-10 proximal
Bma05g01003 Bma-Chr5:48505178 Bma07g01130 Bma-Chr7:45073523 0 transposed
Bma07g00900 Bma-Chr7:31452316 Bma07g01130 Bma-Chr7:45073523 1.54E-67 transposed
Bma09g00100 Bma-Chr9:2727293 Bma07g01130 Bma-Chr7:45073523 3.62E-44 transposed
Bma14g00219 Bma-Chr14:2665037 Bma07g01130 Bma-Chr7:45073523 6.95E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66629 PF00069 Pkinase 3.40E-40 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01130 - - pop:7470963 975.311