Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01154 ATGCCTGGGAGCATGTACAACGGTGATTTAAATTACATTCAAGATCGTATTCCAAGTCGAGTAGAAAGGCTACTGAGAGAAAGAGAGCTAAGAAGAAGCATCAGAGCTTCACTTTCCAACGAGACAACTGACAGTACTAGAGAAGCTGACTTAATTGAGCGTAACCTGCGCTTGAGAGAAGAAGATAACTCTGGCATTTTGTGTGTTGAAAGATTCTTGGAATCTTCAGCACCTAATCGAGCTTTTACTGAGGGATGTGAACGTCAAGATGGGAAGGCTCTTAGACAAAGACTGCTGGTTGTGGCTAACAGGCTGCCAGTTTCTGCAGTTAGGAGAGGGGAAGACTCCTGGTCTCTGGAAATAAGCGCTGGGGGTCTAGTCAGTGCACTTCTAGGTGTGAAGGAGTTTGAGGCAAGATGGATTGGTTGGGCTGGAGTGAATGTGCCAGATGTGATTGGGCAGAAGGCACTCACTAGAGCTTTAGCTGAAAAGAGCTGTATCCCCGTTTTCCTGGATGAAGAAATTGTAGATCGGTATTACAATGGCTACTGCAACAATATTTTGTGGCCTCTTTTTCATTACATTGGACTTCCACAAGAAGATCGTCTAGCCACCACCCGCAGTTTTCAGTCTCAGTTTGCAGCATATAAAAAGGCAAATCAAATGTTTGCTGATGTGGTTAATATGCACTACGAAGAGGGCGATGTTGTTTGGTGCCATGATTACCATCTTATGTACCTCCCAAAATGTCTAAAAGAACATAACAGCAAAATGAAAGTTGGATGGTTTCTTCACACTCCATTTCCTTCTTCTGAAATTCACAGGACGCTACCATCTCGATATGAGCTGCTGCTTTCTGTCCTAGCAGCCGATTTAGTAGGTTTTCATACCTATGACTATGCCCGTCATTTTGTAAGTGCTTGTACACGTATTCTGGGACTTGAGGGTACGCCAGAAGGTGTTGAAGATCAAGGGAAGCTGACTCGAGTAGCTGCGTTTCCTATTGGAATAGACTCTGATCGTTTCACTCGTGCACTTGAGGTTCCCCAAGTTCAAGAACATATAAAAGAGTTAAAGGAAAGGTTTAAAGGACGAAAGGTAATGTTAGGTGTTGATCGACTTGATATGATTAAAGGAATTCCTCAAAAGATTTTGGCCTTTGAAAAATTCTTGGAAGAAAACCCTACTTGGCGTGATAAAGTTGTTTTGTTGCAAATTGCCGTGCCAACAAGAACAGACGTTCCAGAGTATCAAAAATTAACAAGTCAGGTTCATGAAATTGTTGGACGTATAAATGGACGATTCGGTACATTGACAGCTGTTCCTCTTCATCATCTGGATCGTTCACTTGACTTTCATGCTTTATGTGCTCTATATGCCGTTACTGATGTAGCATTAGTCACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAGTTTGTGGCTTGCCAAGATGCAAAGAAAGGGGTGCTCATTCTAAGCGAGTTTGCTGGCGCTGCACAGTCCTTGGGAGCTGGAGCTCTTCTAGTTAACCCTTGGAACATAACTGAAGTTGCAAAATCAATTGACCGTGCTTTGAATATGACTGCTGAGGAGAGAGAGAAACGTCATAGACATAATTTTCATCATGTGACAACACACACTGCTCAGGAGTGGGCCGAAACTTTTGTAAGTGAACTGAATGATACAGTTGTTGAAGCTGAACTGAGGATAAGACAAGCACCACCCCTGCTTCCTTTTGAGGATGCTATAAAACATTATTTGAGGTCAAATAATCGATTACTTATATTGGGATTTAATTCTACACTAACAGAACCAGTGGACACACCTGAGAGAAGAGGCGATCAAATTAGAGAAATGGAACTGAAATTGCATCCAGACTTGAAAGAGTCATTGACTACTCTCTGCCGAAATACAAGGACTACCATTGTTATCCTTAGTGGGAGTGACAGAGCAGTCTTAGATGAGAACTTTGGGAACTATAACATGTGGTTGGCTGCTGAAAATGGTATGTTTCTACGTTTTACTAAGGGAGATTGGATGACTACGATGCCAGAACATCTGAATATGGAATGGGTCGACAGTGTTAAGCATGTTTTCGAGTATTTCACGGAAAGAACACCTCGTTCACATTTTGAACCACGGGAAACTTCACTTGTTTGGAATTATAAATATGCGGGTAATGTGAACCATATTTCCACAAGTGTTTGGAGTTTTATGCTTTCTATGATTTGTGCTGATTATATGATTCTTGTAGATGTTGAATTTGGGAGACTTCAAGCGAGGGATATGTTGCAGCATCTCTGTACAGGCCCAATTTCTAATGCATCTGTCGATGTTGTTCAAGGTAGTCGCTCTGTCGAGGTGCGAGCAGTTGGTGTTACAAAGGGTGCAGCAATTGACCGAATACTAGGAGAGATTGTTCACAGTAAGTCGATGACAACCCCAATAGATTATGTCCTATGCATAGGGCATTTTCTTGGCAAGGACGAGGATGTGTACACTTTCTTTGAGCCTGAGCTTCCTTCTGATACCATAGGTCTAGGAAGGACCAAGGCAATGGATGGACTTAAATTGTCTAGTGAGAGAAGATCTGCTATGAAGCTCCAACCCAACAGAAATGGCTCAAAATCATCTCACACTTGTAAGGCCAGGCATTTGCCAAATTCAGAGAGAACTCCGGCCAGCCACCTCAGTGGAAACGGAAAAAAGCAGTCCCCTGAGAAGATTCAGTGGAACGTGCTTGATCTCAAAGCCGAGAATTACTTCTCTTGTGCCATTGGCCGGACCCGCACCAGTGCTCGATATCTACTCGGATCGTCTGATGATGTCGTCTCGTTTCTTAAGGAGCTTTCTTATGCAGTAGCATTATCCCATTCTTGA 2886 42.76 MPGSMYNGDLNYIQDRIPSRVERLLRERELRRSIRASLSNETTDSTREADLIERNLRLREEDNSGILCVERFLESSAPNRAFTEGCERQDGKALRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDVIGQKALTRALAEKSCIPVFLDEEIVDRYYNGYCNNILWPLFHYIGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNMHYEEGDVVWCHDYHLMYLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRYELLLSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFTRALEVPQVQEHIKELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPTWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPLHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMTAEEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAELRIRQAPPLLPFEDAIKHYLRSNNRLLILGFNSTLTEPVDTPERRGDQIREMELKLHPDLKESLTTLCRNTRTTIVILSGSDRAVLDENFGNYNMWLAAENGMFLRFTKGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFEPRETSLVWNYKYAGNVNHISTSVWSFMLSMICADYMILVDVEFGRLQARDMLQHLCTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDTIGLGRTKAMDGLKLSSERRSAMKLQPNRNGSKSSHTCKARHLPNSERTPASHLSGNGKKQSPEKIQWNVLDLKAENYFSCAIGRTRTSARYLLGSSDDVVSFLKELSYAVALSHS 961
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 45762061 45771562 + Bma026386.1 Bma07g01154 86291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01154 961 Pfam Glycosyltransferase family 20 97 562 IPR001830 GO:0003824|GO:0005992
Bma07g01154 961 SUPERFAMILY HAD-like 594 952 IPR036412 -
Bma07g01154 961 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 96 565 - -
Bma07g01154 961 Gene3D - 687 793 - -
Bma07g01154 961 MobiDBLite consensus disorder prediction 866 884 - -
Bma07g01154 961 Gene3D Glycogen Phosphorylase B; 89 343 - -
Bma07g01154 961 MobiDBLite consensus disorder prediction 893 908 - -
Bma07g01154 961 MobiDBLite consensus disorder prediction 864 908 - -
Bma07g01154 961 Gene3D - 621 807 IPR023214 -
Bma07g01154 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 727 IPR001830 GO:0003824|GO:0005992
Bma07g01154 961 CDD GT20_TPS 97 562 IPR001830 GO:0003824|GO:0005992
Bma07g01154 961 Gene3D Glycogen Phosphorylase B; 344 546 - -
Bma07g01154 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 727 - -
Bma07g01154 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 753 953 - -
Bma07g01154 961 Pfam Trehalose-phosphatase 753 842 IPR003337 GO:0003824|GO:0005992
Bma07g01154 961 Pfam Trehalose-phosphatase 620 728 IPR003337 GO:0003824|GO:0005992
Bma07g01154 961 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 97 562 IPR012766 GO:0003825|GO:0005992
Bma07g01154 961 CDD HAD_TPP 595 854 - -
Bma07g01154 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 753 953 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01154 Bma-Chr7:45762061 Bma05g00708 Bma-Chr5:41135268 1.77E-140 dispersed
Bma01g01475 Bma-Chr1:28170803 Bma07g01154 Bma-Chr7:45762061 0 transposed
Bma14g00269 Bma-Chr14:3159374 Bma07g01154 Bma-Chr7:45762061 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01154 K16055 - csv:101204478 1570.44