Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01212 ATGCCTGGTTCTCCGAACCGGAATGGTGTTGCAGAAAGAAGAAACCGAACATTGATAGACATGGCGCGGAGTATGCAGAGTAACTCCAACCTTCCAAAGTCATTATGGATTGATGCTCTTAAGACGGCTATGTATATATTAAACCGAGTTCCAACCAAGGTTGTTCCAAAGACGCCATTTGAGTCATGGAAAGGTTGGAAACCAAGTTTACGACATATACGCGTTTGGGGATGCCCGTGTGAAGTAAGAGTCTATAATTCGCAAGAAAAGAAACTGGACCCAAGGACTATTAGTGGGTATTTCATTGGATATGCCGAAAGATCTAAGGCGTACAGATTCTATTCTCACAGCACTAGAATTGTGGAATCAATAAATGCAAAATTTCTTGAGAATGACTTGATCGCCGGGTATTACAGATCGATCCTAAACATCGTTCCAGATAATGATCATTTAAAAGCGCAACCATCGTGCTCAAGTAATAGATTGATTGTTACTCATAACAACCCTCGAGACCAACCGGCTGTTGTGAGAACAATCGCGGAAATTCCACAAGTTGTTGATAATGAGCCAGTAGATCAGATTGCTCAGGAGTTACCTGAAATAGTTGTGCAACCAGTTGATCAACAAATTCTACAAGATGATGTTAATCCACGGGTTCGCTTGCCAATGACGAGACATCTCCTCGTGTCATTCTTCTTTCTTGGTTTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTCTTGGCTATACCAATCCAACTTATGCTGCTGCTATACAGCCTTCAATTCCAGTCTTCACATTTCTCTTTGCAGCTGTTATGGGTACAGAAAGAGTGAACTTTCTCAAATTGGAAGGGCAGGCCAAAATTGGAGGGACTCTCATCTGTGTTTCTGGAGCCATATTGATGGTTTTATTTCGTGGCCCAGCTTTAGTTGGAAACGCAGAGTCAGACTTTATGTCTCAAAGTGAAATAAGTGCGAGGGGTCAGCCAGAACCATCTGGATGGTTGGTGTCTAGTTTTTTGGAATTTGGGCTAAATCATTTTCACCTTGGAGTGCTATGCTTAATAGGGAATTGCATGTGCATGGCTGCTTTTCTTGCTATTCAGGCACCAATTTTGAAAAGGTATCCTGCCAATTTATCAGTGACGGCATATTCATACTTCTTTGGTGCAATACTGATGGTGATAACTTCATTAATTGTAAACAATGAGTCAACAGATTGGATTTTGACACAATCAGAAGTTCTTGCCGTTCTCTATGCTGGTATTGTGGCATCTGCCCTTAACTATGGACTTCTAACCTGGTGTAACAAAATCCTAGGGCCTGCGTTAGTGGCCCTCTACAATCCACTTCAACCTGCTGCTTCTGCATTTCTATCCAGAATTTTCCTCGGGAGCCCAATTTATTTAGGAAGTGTTTTTGGAGGAGTTTTAATCATTGCTGGTCTTTATTTGGTGACATGGGCATCATACAGAGAGCGACAAACAGGTTCCGGGATGGGGGGAATTCATCCTCACACGGCTCGGGAGTCCGAGCCGCTCATTCACAAGGACGCATTAAGTAACATTATGTCTTACAAATTTGGACACATTTTCTCAGCAACCTCTTCCCCAATATCTAAAACCATAGATTAG 1644 42.15 MPGSPNRNGVAERRNRTLIDMARSMQSNSNLPKSLWIDALKTAMYILNRVPTKVVPKTPFESWKGWKPSLRHIRVWGCPCEVRVYNSQEKKLDPRTISGYFIGYAERSKAYRFYSHSTRIVESINAKFLENDLIAGYYRSILNIVPDNDHLKAQPSCSSNRLIVTHNNPRDQPAVVRTIAEIPQVVDNEPVDQIAQELPEIVVQPVDQQILQDDVNPRVRLPMTRHLLVSFFFLGLTGIFGNQLLFLIGLGYTNPTYAAAIQPSIPVFTFLFAAVMGTERVNFLKLEGQAKIGGTLICVSGAILMVLFRGPALVGNAESDFMSQSEISARGQPEPSGWLVSSFLEFGLNHFHLGVLCLIGNCMCMAAFLAIQAPILKRYPANLSVTAYSYFFGAILMVITSLIVNNESTDWILTQSEVLAVLYAGIVASALNYGLLTWCNKILGPALVALYNPLQPAASAFLSRIFLGSPIYLGSVFGGVLIIAGLYLVTWASYRERQTGSGMGGIHPHTARESEPLIHKDALSNIMSYKFGHIFSATSSPISKTID 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 46921886 46934953 - Bma026461.1 Bma07g01212 86349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01212 547 PANTHER WAT1-RELATED PROTEIN 216 522 IPR030184 GO:0016021|GO:0022857
Bma07g01212 547 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 308 - -
Bma07g01212 547 Pfam EamA-like transporter family 353 490 IPR000620 GO:0016020|GO:0016021
Bma07g01212 547 Pfam EamA-like transporter family 226 304 IPR000620 GO:0016020|GO:0016021
Bma07g01212 547 PANTHER WAT1-RELATED PROTEIN 216 522 - -
Bma07g01212 547 SUPERFAMILY Multidrug resistance efflux transporter EmrE 411 495 - -
Bma07g01212 547 Gene3D - 1 80 IPR036397 GO:0003676
Bma07g01212 547 ProSiteProfiles Integrase catalytic domain profile. 1 67 IPR001584 GO:0015074
Bma07g01212 547 SUPERFAMILY Ribonuclease H-like 2 75 IPR012337 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01212 Bma-Chr7:46921886 Bma14g00821 Bma-Chr14:9136598 8.24E-174 dispersed
Bma14g00790 Bma-Chr14:8884259 Bma07g01212 Bma-Chr7:46921886 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01212 - - csv:101222886 526.939