Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01248 ATGGCCTTCAATGGTTCAGAGCAGCCCTTATTGTCCGGATCATTAGATCCTAATTGCGAAAGAAAGACAATGAATGTAACTATGAGGAAGAGAAGATTTCGTCGCACCAGAAGTGCTCCCATTGTAGATTCTGGACCTTCACAGGAAACTCACTTTGACCCCAATCCACCTCCTGGGTCCATATTTGGGAATTTACACCTGAGTTTAAAGAAAGTTGTTTTATTCTTAGCCATTTATCTTGGTATGGGAACTATATGTTTCTACTTCGTCAGGAACCAAATCAAGGGGCTAAAAACAAATGGAATAATTGATGCTATCTATTTCTGCATTGTTACAATGACCACAGTTGGATATGGAGACTTGGTGCCTAACTCTGTACTTACAAAACTACTTGCCTGTGCTTTTGTCTTCACAGGAATGGCCCTAATTGGACTCGTACTGAGCAAAGCCGCTGATTATTTAGCAGAAAAACAAGAAATGTTTTTGGTAAAGGCCTTACATTTACAACAAACTACTTCTCCTGGTGCGACTATGAAAGAAATTGAGACCAATAAAGTGAAATACAAGTGCCTATTGGTCTTTTTCCTTTTGCTGGTGCTCATAATTTCTGGGACTATATTTTTAATTACGGTTGAAGAGTTGGACCCCGTTGATGCTTTTTATTGTGTCTGTTCTACTATTACAGCTCTAGGCTACGGGGATCAAAGTTTCTCGACTAGCACTGGACGTGTTTTTGCAATATTCTGGATTTTAACCAGCACAATTTCTTTGGCTCAGTTTTTCTTTTACATCGCTGAGCTGCATTCTGAAAGAAGACAAAGGGCATTGGTCAAATGGGTTCTAAACCGGAAAACAACATACTTAGATCTTGAGGCAGCAGATTTGGATGATGATGGAGTTGTGGGGGCACCCGAATTTGTCATATTTAAGCTAAAAGAAATGGGAAAAATTACCCAAGATGACATTTCAGTTATCATGGAAGAGTTCGAGAATCTTGATGTTGATCAGTCGGGAACCTTAACAGTTTCTGATATAGAACAAGCTCAAGCATCTCAGAGAAAATTATGA 1068 39.33 MAFNGSEQPLLSGSLDPNCERKTMNVTMRKRRFRRTRSAPIVDSGPSQETHFDPNPPPGSIFGNLHLSLKKVVLFLAIYLGMGTICFYFVRNQIKGLKTNGIIDAIYFCIVTMTTVGYGDLVPNSVLTKLLACAFVFTGMALIGLVLSKAADYLAEKQEMFLVKALHLQQTTSPGATMKEIETNKVKYKCLLVFFLLLVLIISGTIFLITVEELDPVDAFYCVCSTITALGYGDQSFSTSTGRVFAIFWILTSTISLAQFFFYIAELHSERRQRALVKWVLNRKTTYLDLEAADLDDDGVVGAPEFVIFKLKEMGKITQDDISVIMEEFENLDVDQSGTLTVSDIEQAQASQRKL 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47466945 47468169 - Bma026502.1 Bma07g01248 86385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01248 355 SUPERFAMILY Voltage-gated potassium channels 183 286 - -
Bma07g01248 355 MobiDBLite consensus disorder prediction 37 56 - -
Bma07g01248 355 Gene3D - 172 279 - -
Bma07g01248 355 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 20 345 - -
Bma07g01248 355 SUPERFAMILY Voltage-gated potassium channels 65 156 - -
Bma07g01248 355 Pfam Ion channel 196 266 IPR013099 -
Bma07g01248 355 Pfam Ion channel 75 155 IPR013099 -
Bma07g01248 355 Gene3D - 65 160 - -
Bma07g01248 355 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 20 345 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bma07g01248 355 SUPERFAMILY EF-hand 280 348 IPR011992 -
Bma07g01248 355 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Bma07g01248 355 ProSitePatterns EF-hand calcium-binding domain. 294 306 IPR018247 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01248 Bma-Chr7:47466945 Bma10g01122 Bma-Chr10:35936040 1.42E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01248 K05389 - tcc:108662931 456.062