Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01253 ATGTTTTTCTTGCTAGTTTTTGGGAGAATTAAAGTTGATTTGGCAGAAAGTATTGTTAATAGAGACAAGTATATAAGTTGGGATGATCTGAAGGTGGATAAAATGCAGATAATGAGTTCTTCCGGCGATGAAAATCATAAAAGTCGGATTATTGTCGTCGATAAAAATGGCGGAGGAGATTCAGTAACAGTTCAAGGAGCTGTTGACATGGTTCCTGAAGAGAATACAAAGAGAGTGAAAATTTTCATTCTTCCAGGAATTTACAGGGAGAAAGTTTTTGTTCCAAGAAACAAACCATATGTTTCCTTTATCGGCGACGAGAATCGAACTTCGGACACTGTAATTTCATGGAACGACAAAGCATCTGACAGAGATGAAAATGGGAACAGTCTAGGAACATACAGGTCAGCATCTGTAGCGATCGAATCGGATTACTTTTGCGCTACCGCGATCACGTTCGAGGCAAGAACACTGTTTTTTTTTTTTTTTTTGTATCAGTCTATTAACACGGTAATGGCTGTGCCCGGAGGAGAGGGAATGCAAGCAGTTGCAGTGAGAATTGCCGGAGATAAAGCCATGTTCTACAGAGTTCGAGTACTGGGAGATCAAGACACTCTCTTAGACGAATCTGGAACCCACTATTTCTACAAATGTCACATTCAAGGAAGCGTAGATTTCATCTTCGGAAGATCCAAATCGTTATACCAGGTAAAACAAATCTCTCATCGGAAAATATGCTTCTTCTTGAATTTTACAGTCCTTTTATGGAACATTCAGCACTGTATGCTTATATCAACGGCCAAGAACTACGGCGCCATTGCAGCTCATCACAGAGATTCTCTCGACGAAGACACAGGCTTCTCCTTCGTTCACTGCAAAATCAATGGAACTGGCAATGTTCTTCTTGGAAGAGCCTGGGGAAACTACTCGAGAGCAATCTACTCCTACTGTTACATGACAGATATCATAAACCCTCACGGCTGGAGCGACTGGAACTACCCATCAAGAGAAAGGACGGCGGTATTTGGGGAGTTCAGATGCAGAGGCAAGGGGGCTGATACGAGAGGAAGAGTCCCATGGTCGAAGACTTTCACCATCGAGGAAGCCAAGCCTTTTTTAAACTTGAATTTCATCAATGGAGATCAGTGGCTTAGACTGTAG 1161 42.2 MFFLLVFGRIKVDLAESIVNRDKYISWDDLKVDKMQIMSSSGDENHKSRIIVVDKNGGGDSVTVQGAVDMVPEENTKRVKIFILPGIYREKVFVPRNKPYVSFIGDENRTSDTVISWNDKASDRDENGNSLGTYRSASVAIESDYFCATAITFEARTLFFFFFLYQSINTVMAVPGGEGMQAVAVRIAGDKAMFYRVRVLGDQDTLLDESGTHYFYKCHIQGSVDFIFGRSKSLYQVKQISHRKICFFLNFTVLLWNIQHCMLISTAKNYGAIAAHHRDSLDEDTGFSFVHCKINGTGNVLLGRAWGNYSRAIYSYCYMTDIINPHGWSDWNYPSRERTAVFGEFRCRGKGADTRGRVPWSKTFTIEEAKPFLNLNFINGDQWLRL 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47499335 47501216 - Bma026508.2 Bma07g01253 86390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01253 386 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Bma07g01253 386 SUPERFAMILY Pectin lyase-like 48 384 IPR011050 -
Bma07g01253 386 PANTHER PECTINESTERASE QRT1 259 386 - -
Bma07g01253 386 PANTHER PECTINESTERASE QRT1 16 240 - -
Bma07g01253 386 Pfam Pectinesterase 51 155 IPR000070 GO:0030599|GO:0042545
Bma07g01253 386 Pfam Pectinesterase 171 381 IPR000070 GO:0030599|GO:0042545
Bma07g01253 386 Gene3D - 45 386 IPR012334 -
Bma07g01253 386 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 240 - -
Bma07g01253 386 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 259 386 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01253 Bma14g00176 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01253 Bma-Chr7:47499335 Bma14g00176 Bma-Chr14:2314174 0 dispersed
Bma14g00694 Bma-Chr14:7557918 Bma07g01253 Bma-Chr7:47499335 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01253 K01051 - jre:108983471 495.352