Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01256 ATGACCTACAAACCATTGTTTGCCATGGAAGAGTCATATACCTCCTTCCCAATGATCTGCTCTTTCTTGCTTCTTCTGCTCATGGCGGTGAGGATAGCCAAACGAAACAACTCATCTCCAAAACTGCCACCCGGCCCATGGAAATTTCCCATCGTTGGCGATATGCACCGCTTGATCGGCGACCACCCCCACATCCGCTTGAAACAATTGGCCGATAGATACGGTCCGGTGATGCATCTGCAACTCGGAGAAATCTCCACCGTCGTCGTTTCCTCCGCCGAAATCGCAAGAGAGGTCATGAAAACCAACGACCTTAATTTTGCTAACCGACCTGCTACTCTCTTGAGCTCTTACTTCACGTATTGCCAAAAAGACATCGCCTTTGCTCCCTATGGAGATTTGTGGAGAGAGATGAGAAAAATATGTACGCTTGAACTTTTCAGCGCGAAAAGGGTTCAGTCATTTCGGCCAATCATGAACCGAGAAACGGCGAAAATGGTGGAAGAGCTCGAATCTAATAACGGGTCGGTGGTGAGTTTGAGTAAAATGATATTTTCCGCTCTTATTACCTTCACTACCAACGCTGCGTTTGGAGGAAAGTGTAACGAGCAGGAAGAGTTTCTTGCTCTGTCCGAAAAGATTCTGTTTTTGCTGACTGGTTTTCGGTTGGTCGATGTGTTTCCTTCCTTTAAATTTCTTCATTACTTAGGTGGATCTAAGAACAAAGCAGAAAAACTTTATAAAGAATGCGATCGAATCCTGGAAAACATCATAAATGCACATAGATCAGAGTCAGACAAGGGAAAATCAGATGGAGATGTTCAAGAACCAGAGGATTTTGTCAATGTTCTTCTCAAAATTCAAGAGAAAGACGGCCTTCCGTTTCCCATGGCAAACGAGAACGTCAAAGCAATTATCTTGAATGTTTTCCTTGGAGGATCAGGAACATCGGCCACGCTGATCGAGTGGGCGATCTCAGAGCTCATAAGACATCCTGAAACGATGAAGAAAGTTCAAGCAGAAATCAGACAAGTTTTCGATTCAAAAGGACAAATAGACGAATCAGGTCTCCAAGAGCTAAAATACTTCAAACTAATCATAAAAGAAACGCTGAGACTACACCCTCCAGGCCCATTATTACTCCCGAGAGAAAGCAGGAACGATGGCAAAATCAACGGCTACACATGA 1188 44.28 MTYKPLFAMEESYTSFPMICSFLLLLLMAVRIAKRNNSSPKLPPGPWKFPIVGDMHRLIGDHPHIRLKQLADRYGPVMHLQLGEISTVVVSSAEIAREVMKTNDLNFANRPATLLSSYFTYCQKDIAFAPYGDLWREMRKICTLELFSAKRVQSFRPIMNRETAKMVEELESNNGSVVSLSKMIFSALITFTTNAAFGGKCNEQEEFLALSEKILFLLTGFRLVDVFPSFKFLHYLGGSKNKAEKLYKECDRILENIINAHRSESDKGKSDGDVQEPEDFVNVLLKIQEKDGLPFPMANENVKAIILNVFLGGSGTSATLIEWAISELIRHPETMKKVQAEIRQVFDSKGQIDESGLQELKYFKLIIKETLRLHPPGPLLLPRESRNDGKINGYT 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47701647 47702926 + Bma026513.1 Bma07g01256 86393

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01256 395 PANTHER PREMNASPIRODIENE OXYGENASE-LIKE 21 394 - -
Bma07g01256 395 SUPERFAMILY Cytochrome P450 41 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01256 395 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01256 395 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01256 395 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01256 395 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01256 395 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01256 395 Pfam Cytochrome P450 43 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01256 395 Gene3D Cytochrome P450 35 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01256 395 PANTHER CYTOCHROME P450 71B11-RELATED 21 394 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01256 - - K23806 mesc:110611911 397.897
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01256 Bma-Chr7:47701647 Bma02g01302 Bma-Chr2:55157674 1.28E-105 dispersed
Bma07g01256 Bma-Chr7:47701647 Bma07g01265 Bma-Chr7:48057991 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g634 . Blo03g01476 . Bda09g00421 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma07g01256 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000106 14 8 5 4 4 8 0 8 5 13 4 7 6 8 6 16 5 16 1 6 10 8 6 12 5 13 10 7 10 3 228