Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01270 ATGTCGATTGATAACTCAGAACCTTCCGATAAGGACTCAGAGCCCTTCGTCGAGACCAATCCGACGGGCAGATACGGCCGCTATGACGAGCTACTCGGATCCGGCGCGGTGAAGAAAGTTTACAGAGCCTTCGATCAGGAAGAAGGCAAAGAAGTAGCGTGGAACCAAGTGAAATTGAGAAACTTGTCCGGCGATCCGGCGATGATAGAGAGGCTCTACTCCGAAGTGAGACTGCTGAGAACATTGAAAAACAAGAACATTATTTCATTGTACGACGTTTGGCGAAACGAAGAGCACAACACCTTGAATTTCATCACAGAGGTTTGCACGAGTGGGAATTTGAGAGAATATCGAAAGAAGCATAAGCAGGTTTCGGTGAAGGCTTTCAAGAAATGGTCGAAGCAGATTTTGGAAGGTTTGGATTATTTGCATACCCACGAACCTTGCGTTATTCACAGAGATCTCAACTGTAGCAATGTCTTCGTCAATGGCAATACCGGACAGGTTAAGATTGGCGATTTGGGATTAGCTGCAATAGTGGGCAAGAACCATTCTGCTCATTCAATTCTAGGTACGCCGGAATTCATGGCGCCGGAGCTGTACGAGGAAAATTATACAGAAATGGTGGATATTTACTCCTTTGGAATGTGTTTATTGGAGATGGTGACTCTAGAAATTCCTTACAGCGAATGTGACAACATCGCCAAAATATACAGAAAAGTGACTACCGGGGTACGGCCGGCGGCGCTAAATAAGGTCGGAGACCCTGAAGTGAAGGAGTTCATCGAAAAATGCTTGGCTAAACCGAGAGAAAGACCGACGGCCAGCGACCTCCTCCGGGATTTTTTCTTCCACGAAGTAGATAAAGAAGAAGACGACGATTCATCGTCTTCTCTATTACAAGAACAGATTTTTGCATAA 921 45.6 MSIDNSEPSDKDSEPFVETNPTGRYGRYDELLGSGAVKKVYRAFDQEEGKEVAWNQVKLRNLSGDPAMIERLYSEVRLLRTLKNKNIISLYDVWRNEEHNTLNFITEVCTSGNLREYRKKHKQVSVKAFKKWSKQILEGLDYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYEENYTEMVDIYSFGMCLLEMVTLEIPYSECDNIAKIYRKVTTGVRPAALNKVGDPEVKEFIEKCLAKPRERPTASDLLRDFFFHEVDKEEDDDSSSSLLQEQIFA 306
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 48260017 48261032 + Bma026537.1 Bma07g01270 86407
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01270 306 PIRSF TyrPK_CSF1-R 25 131 - -
Bma07g01270 306 PIRSF TyrPK_CSF1-R 118 302 - -
Bma07g01270 306 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 8 296 - -
Bma07g01270 306 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Bma07g01270 306 CDD STKc_WNK 24 284 - -
Bma07g01270 306 MobiDBLite consensus disorder prediction 1 22 - -
Bma07g01270 306 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Bma07g01270 306 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01270 306 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01270 306 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 296 - -
Bma07g01270 306 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01270 Bma-Chr7:48260017 Bma15g00813 Bma-Chr15:19480611 5.40E-105 dispersed
Bma07g01270 Bma-Chr7:48260017 Bma09g00404 Bma-Chr9:34113175 2.85E-116 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66632 PF00069 Pkinase 1.50E-53 CL0016 Bma PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01270 K08867 - tcc:18593374 496.893