Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g01270 | ATGTCGATTGATAACTCAGAACCTTCCGATAAGGACTCAGAGCCCTTCGTCGAGACCAATCCGACGGGCAGATACGGCCGCTATGACGAGCTACTCGGATCCGGCGCGGTGAAGAAAGTTTACAGAGCCTTCGATCAGGAAGAAGGCAAAGAAGTAGCGTGGAACCAAGTGAAATTGAGAAACTTGTCCGGCGATCCGGCGATGATAGAGAGGCTCTACTCCGAAGTGAGACTGCTGAGAACATTGAAAAACAAGAACATTATTTCATTGTACGACGTTTGGCGAAACGAAGAGCACAACACCTTGAATTTCATCACAGAGGTTTGCACGAGTGGGAATTTGAGAGAATATCGAAAGAAGCATAAGCAGGTTTCGGTGAAGGCTTTCAAGAAATGGTCGAAGCAGATTTTGGAAGGTTTGGATTATTTGCATACCCACGAACCTTGCGTTATTCACAGAGATCTCAACTGTAGCAATGTCTTCGTCAATGGCAATACCGGACAGGTTAAGATTGGCGATTTGGGATTAGCTGCAATAGTGGGCAAGAACCATTCTGCTCATTCAATTCTAGGTACGCCGGAATTCATGGCGCCGGAGCTGTACGAGGAAAATTATACAGAAATGGTGGATATTTACTCCTTTGGAATGTGTTTATTGGAGATGGTGACTCTAGAAATTCCTTACAGCGAATGTGACAACATCGCCAAAATATACAGAAAAGTGACTACCGGGGTACGGCCGGCGGCGCTAAATAAGGTCGGAGACCCTGAAGTGAAGGAGTTCATCGAAAAATGCTTGGCTAAACCGAGAGAAAGACCGACGGCCAGCGACCTCCTCCGGGATTTTTTCTTCCACGAAGTAGATAAAGAAGAAGACGACGATTCATCGTCTTCTCTATTACAAGAACAGATTTTTGCATAA | 921 | 45.6 | MSIDNSEPSDKDSEPFVETNPTGRYGRYDELLGSGAVKKVYRAFDQEEGKEVAWNQVKLRNLSGDPAMIERLYSEVRLLRTLKNKNIISLYDVWRNEEHNTLNFITEVCTSGNLREYRKKHKQVSVKAFKKWSKQILEGLDYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYEENYTEMVDIYSFGMCLLEMVTLEIPYSECDNIAKIYRKVTTGVRPAALNKVGDPEVKEFIEKCLAKPRERPTASDLLRDFFFHEVDKEEDDDSSSSLLQEQIFA | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 48260017 | 48261032 | + | Bma026537.1 | Bma07g01270 | 86407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g01270 | 306 | PIRSF | TyrPK_CSF1-R | 25 | 131 | - | - | |
Bma07g01270 | 306 | PIRSF | TyrPK_CSF1-R | 118 | 302 | - | - | |
Bma07g01270 | 306 | PANTHER | SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN | 8 | 296 | - | - | |
Bma07g01270 | 306 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 290 | - | - | |
Bma07g01270 | 306 | CDD | STKc_WNK | 24 | 284 | - | - | |
Bma07g01270 | 306 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bma07g01270 | 306 | Gene3D | Phosphorylase Kinase; domain 1 | 10 | 107 | - | - | |
Bma07g01270 | 306 | Pfam | Protein kinase domain | 29 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma07g01270 | 306 | ProSiteProfiles | Protein kinase domain profile. | 26 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma07g01270 | 306 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 8 | 296 | - | - | |
Bma07g01270 | 306 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 284 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g01270 | Bma-Chr7:48260017 | Bma15g00813 | Bma-Chr15:19480611 | 5.40E-105 | dispersed | |
Bma07g01270 | Bma-Chr7:48260017 | Bma09g00404 | Bma-Chr9:34113175 | 2.85E-116 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66632 | PF00069 | Pkinase | 1.50E-53 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g01270 | K08867 | - | tcc:18593374 | 496.893 |