Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01272 ATGGAAGCCAGGCCGGTGGTGAGAAAATTTCAGGCGAGGCCTCAACACGAAGGGGTAGGCGCCATTGTTAGAAGGAGCATAGGAAGGTTTGAGCTTAAATCCTTCGATCCTTTCCTTGTCTTGGATGAATTCTCAGTTACTGCTCCGGCTGGATTCCCTGATCATCCACATAGAGGTTCGATAATCATGGGAGCTATGGACCATGAAGACTTCGAAGGACACAAGGGAAGAATAAGTGCAGGAGGCCTTCAATGGATGACAGCAGGAAGAGGGATTGTTCATTCTGAAACTCCCGTCTCCAATGGCACCCAGATGGGTTTACAGCTCTGGATCAATCTCTCTTCCAAACACAAAATGATTCATCCAAGATACCAAGAAATTCCAAGTAGAGAAATAACAGAAGCATCAAAAGACGGGATCAAAGTAAGAGTAATTGCAGGATCCGCCATGGGAGTGAAATCTCCCATTTACACGAAAACTCCCACCATTTATCTCGACTTCACTCTCAAACCAGGAGCCCATCTTCTCCAGCCCATACCCATTTCATACAACGCATTCGTCTACGTAGTAGAAGGCGAAGGAGAGTTCGGAGGGTCCAGTCCAACGGCGGCGACGGCTCACCATCTTCTTCTTCTCGGCTCCGGCGACTGCTTGAAGGCCTGGAATAGGTCGTTGAAGAAGGAGCTGAGGTTTATTTTGGTGGGGGGAGAGCCGTTGAATGAGCCGGTGGTGCAGTTGGGGCCGTTCGTGATGAACAGTGAAGAGGAGATCGATGAAGCCATTAATGACTTCGAGAGTTGCAGAAATGGGTTTGAGAATGCTAAGAACTGGAGATCTTCAGCTTCCTTTGGGTTTTGA 858 48.37 MEARPVVRKFQARPQHEGVGAIVRRSIGRFELKSFDPFLVLDEFSVTAPAGFPDHPHRGSIIMGAMDHEDFEGHKGRISAGGLQWMTAGRGIVHSETPVSNGTQMGLQLWINLSSKHKMIHPRYQEIPSREITEASKDGIKVRVIAGSAMGVKSPIYTKTPTIYLDFTLKPGAHLLQPIPISYNAFVYVVEGEGEFGGSSPTAATAHHLLLLGSGDCLKAWNRSLKKELRFILVGGEPLNEPVVQLGPFVMNSEEEIDEAINDFESCRNGFENAKNWRSSASFGF 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48268993 48271084 - Bma026539.2 Bma07g01272 86409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01272 285 PANTHER - 2 282 - -
Bma07g01272 285 CDD cupin_pirin_C 161 238 - -
Bma07g01272 285 PIRSF Pirin 2 278 IPR012093 -
Bma07g01272 285 Pfam Pirin 23 111 IPR003829 -
Bma07g01272 285 Pfam Pirin C-terminal cupin domain 164 270 IPR008778 -
Bma07g01272 285 CDD cupin_pirin_N 23 113 - -
Bma07g01272 285 SUPERFAMILY RmlC-like cupins 6 279 IPR011051 -
Bma07g01272 285 Gene3D Jelly Rolls 17 265 IPR014710 -
Bma07g01272 285 PANTHER PIRIN-RELATED 2 282 IPR012093 -
Bma07g01272 285 Gene3D Jelly Rolls 133 239 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01176 Bma-Chr5:50899001 Bma07g01272 Bma-Chr7:48268993 3.37E-116 dispersed
Bma07g01272 Bma-Chr7:48268993 Bma04g00875 Bma-Chr4:11518220 3.93E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01272 K06911 - zju:107433169 430.254