Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01273 ATGACAAGTGTACCCGATGTGGTCTTATGGTGTGATGTGCAATTAACAAGAGACGGAGCTGGAATTTGTCTTCCAGATTTGAAACTAGAAAACTCAACTGATATTGCCGACGTGTATAACCAATCGAAGAATAGTTACTCGGTGAATGGGGTTAAAACTACAGCATGGTTTTCTATTGATTTCACGCTTCATGATCTTCGATCTGTTACCAATTGTTTTGCTCATATGGGAAATACTGATAAGAAACAAGCAAGACCGTTGGTTATTTCGAAGTTTGGAGCTAGTGGAGACTACCCTGGCTGCACTGACTTGGCATACACCAAAGCTATTTCAGATGATGTGGAAATACTGGACTGTCCAGTTCAAATAGCGAAAGATGGGACACCATTTTGCGCGAGCTCTATAAACCTTATCGATAGTACAACAATTGCTGAGACAGATTACAGCAACCTTTCGAAAACAATTCCAGAAATTAAGACTGGTAGTGGAATCTATGCTTTTGACCTTACATGGCCTCAGATTAGCAGACTGACTCCGGCCATATTGAATCCATATCATAATCACGATTTCTATCGGAATCCCGCGTTCAAAAACAGTGGGAAATTTCTTACGCTGACTTCGTTCTTGGTTGTGGCGAAGAACACGAGCTCCCTCTCGGGTGTCTTGATCAGCATAGAGAATGCGGCCTACCTTTTGAAGCACGAGAATTTGAGTGTGGTTGATGCAGTCCTTGATGGCTTGAGTAAAGCAGGCTATGACAATCAGACCTCTCAAAAAGTTATGATTAAATCCACTAACAGTGCTGTTTTGAAAAAGATTAAGGAAAAAAGCAAATATCTTCTTGTATATGACGTTGATGAGACAATTAGTGATGCTCTTGATTCTACTATCATGGACATCAAGAGTTTTTCCGATGCCGTCGTTGTAGGAAAGTCCTCCGTTTTTACGGTAAACTCATTATTATTCCTCACCGGTGCCACAAATGTCGTCGAGAGATTGCAAGCGGTTAATCTATCTGTTTATGTGCAAACTTTTAGCAACGAAGTAGTGTCTCAACCGTGGGATTTCTTCTCCGATTCAACGGTGGAGATCAACTCCTATTTTATGGGGGCTGGCATCGATGGTGTCATCACGGACTTCCCCAAGACATCAGCTCGATACAAAAGTAAGACTTTTTAA 1179 41.48 MTSVPDVVLWCDVQLTRDGAGICLPDLKLENSTDIADVYNQSKNSYSVNGVKTTAWFSIDFTLHDLRSVTNCFAHMGNTDKKQARPLVISKFGASGDYPGCTDLAYTKAISDDVEILDCPVQIAKDGTPFCASSINLIDSTTIAETDYSNLSKTIPEIKTGSGIYAFDLTWPQISRLTPAILNPYHNHDFYRNPAFKNSGKFLTLTSFLVVAKNTSSLSGVLISIENAAYLLKHENLSVVDAVLDGLSKAGYDNQTSQKVMIKSTNSAVLKKIKEKSKYLLVYDVDETISDALDSTIMDIKSFSDAVVVGKSSVFTVNSLLFLTGATNVVERLQAVNLSVYVQTFSNEVVSQPWDFFSDSTVEINSYFMGAGIDGVITDFPKTSARYKSKTF 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48272961 48275843 - Bma026540.1 Bma07g01273 86410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01273 392 ProSiteProfiles GP-PDE domain profile. 86 388 IPR030395 GO:0006629|GO:0008081
Bma07g01273 392 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 2 70 - -
Bma07g01273 392 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 71 389 - -
Bma07g01273 392 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 2 70 - -
Bma07g01273 392 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 71 389 - -
Bma07g01273 392 SUPERFAMILY PLC-like phosphodiesterases 85 387 IPR017946 GO:0006629|GO:0008081
Bma07g01273 392 CDD GDPD_SHV3_repeat_2 86 387 - -
Bma07g01273 392 Pfam Glycerophosphoryl diester phosphodiesterase family 93 383 IPR030395 GO:0006629|GO:0008081
Bma07g01273 392 SUPERFAMILY PLC-like phosphodiesterases 8 70 IPR017946 GO:0006629|GO:0008081
Bma07g01273 392 Gene3D Phosphatidylinositol (PI) phosphodiesterase 7 84 IPR017946 GO:0006629|GO:0008081
Bma07g01273 392 Gene3D Phosphatidylinositol (PI) phosphodiesterase 85 387 IPR017946 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01273 Bma13g01101 CCT
Bma07g01273 Bma14g00315 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01273 Bma-Chr7:48272961 Bma14g00315 Bma-Chr14:3909676 6.51E-09 dispersed
Bma13g01099 Bma-Chr13:43937359 Bma07g01273 Bma-Chr7:48272961 1.65E-10 wgd
Bma14g00313 Bma-Chr14:3882483 Bma07g01273 Bma-Chr7:48272961 1.15E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01273 - - bhj:120086180 436.417