Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01281 ATGGCATCCTCTTCGGATTCATGGGTGAAGGAATATAATGAAGCAGTGAAACTTGCTGATGATATCAATGGAATGATCTCTGAGCGTAGTTCGGTTTCTGTATCTGGACCAGAAGCTCAGCGCTATGCCTCTGCTATTCGCAGAAAGATCACAATATTGGGAACGAGGCTTGATAGCCTACTGGCCCTCTTGTCTAGAATTCCTGGAAAACAGGCCATCTCTGATAAAGAGATGAATCGCCGGAGGGACATGGTTACAAATTTAAAATCAAAAGTTAACCAAATGGCCTCACAATTAAACATGTCAAACTTTGCTAATCGGGACAGCTTGCTTGGTCCAGAAATAAAAGCAGCTGATCCCATGAACAGAACAGTAGGCCTGGACAACCAAGAACAAGACGAGGACCTGCAAAAGCTGGAGGAGACTGTAATAAGTACAAAACATATTGCTTTGGCAGTCAATGAAGAACTTGACATTCACACCAGACTAATTTTTGACTTTAGCTGGTGCTTCCTTGCACAGGATGACTTGGATCAACATGTAGATGTCACTGACTCTCGATTACGGCGAGTGCAGAAGAACCTAGCAATTTTAAACAAGCGTACAAAAGGAGGTTGCTCGTGCTTGTGCATGCTTTTATCGGTTGTCGGAATCGTGATTCTGGTTGTTGTCATATATCTTCTCATCAGGTATTTGTAA 699 42.78 MASSSDSWVKEYNEAVKLADDINGMISERSSVSVSGPEAQRYASAIRRKITILGTRLDSLLALLSRIPGKQAISDKEMNRRRDMVTNLKSKVNQMASQLNMSNFANRDSLLGPEIKAADPMNRTVGLDNQEQDEDLQKLEETVISTKHIALAVNEELDIHTRLIFDFSWCFLAQDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCMLLSVVGIVILVVVIYLLIRYL 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48477958 48479680 - Bma026553.1 Bma07g01281 86418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01281 232 PANTHER SYNTAXIN-51-LIKE 1 228 - -
Bma07g01281 232 SUPERFAMILY SNARE fusion complex 129 197 - -
Bma07g01281 232 PANTHER SYNTAXIN 1 228 IPR045242 -
Bma07g01281 232 Pfam SNARE domain 175 224 IPR000727 -
Bma07g01281 232 SUPERFAMILY t-snare proteins 19 100 IPR010989 GO:0016020|GO:0016192
Bma07g01281 232 Gene3D - 130 200 - -
Bma07g01281 232 CDD SNARE_Qc 130 196 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01281 Bma14g00320 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00582 Bma-Chr10:7155146 Bma07g01281 Bma-Chr7:48477958 2.83E-89 transposed
Bma14g00320 Bma-Chr14:3997555 Bma07g01281 Bma-Chr7:48477958 1.77E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01281 K08503 - cit:102608030 317.775