Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01302 AGGACTATAGCTGAGAAAACGATGAATATATTCATCGGGGTCTTCATCCTCGTCATCCCCGTTTTCCTACTTCTTACCAGAAGAAGTAAATCATCGAAAAGGCTCCCTCCTGGAGGGCTGGGAATTCCAATCATAGGCCAAAGCATTAGCTTTCTCCGAGCCATGAGGACGAACACTGCAGAACAATGGCTGCACCAAAGGATCAAAAAGTATGGACCGGTCTCCAAGCTCAGTCTCTTCGGAAAACCGACTGTTTTCATAAGCGGACAGTCTGCGAATAAGCTAGTCTTCACCAGTGACGATAACACCATCAGTAACCAACAAACCAAGTCCATCACGATGATTTTAGGCGACCGGAGTATAGTTGAGCTCAGCGGAGAAGACCATAAACGCGTAAGAGGTGCAATCCTATCGTTCTTAAGACCGGATTCATTGAAAAAATACGTCCGAATAATGGACGAAGAAGTCAGAGAGCACCTCAAGATCCACTGGCAAGGCCAGCAAGAAGTCTCTGTCTTGCCCTTGATGAAGACTCTCACATTCAACATGATTTGTACGCTTCTGTTCGGGATTGAGAAAGGAATCGCGAGAGAAAAATATATGGCTTCCTTCCGGACGCTGATGAGAGGAATATGGTCGGTTCCGATCGACTTGCCGTTCAGTTCATTCAACAAAAGCTTGCGAGAAAGCAAAAGGATCCAAGCCATGTTAAAGGCTCTGATTGAAGAGAAGAAAATAAAACTCGAAAAAGAGGTCGATGCTCCTCATCAAGATCTCATCACTCACTTGCTCAGTCTTCAAAAAGAAGGCAGCAATGAAGAATTAAGCGAGAAGGAAATCGTCCATAATGCGATAGCCGTCATGATGGCCGGACACGATACGACATCTGTTCTGCTTACTTTCATAATGAGGCTGCTGGCTAAAGATGAAGCTGTTTACGCAGCCGTTCTTCACGAACATGAAGAGATAGAAAAAAGCAAGCTCCCTGGAGAGTACCTGAGCTGGGAAGATCTTAACAAGATGAAGTACACATGGAGAGTAGCTCTCGAAATATTGAGAGTCGTCCCTCCGGTTTTCGGCGGATTCCGACAGGCCTTGAAAGATATCGAATTTGATGGATATCTCATTCCGAAAGGATGGCGAATCTTCTGGGCGACGCCGATGACGCACATGGACGAGAGCATATTTCCAGAGCCGTCGAAGTTTGATCCGAGTAGATTTGAGAACCAATCTTCGGCCTCTCGACTTTGTTTTGTGCCGTTCGGGGGTGGTCCGAGAATCTGTCCCGGAAATGAGTTTGCAAGGATAGAAACTCTTGTTGCCATCCATTACATCATTACACACTTCACCTGGAAGCTATCTGCTGATGATCTTTTCATAAGAGATCCCGGTCCAACACCAACTAAAGGATTACCTATTCAAATTACACGGAGGAAAGCATTATAA 1446 45.5 RTIAEKTMNIFIGVFILVIPVFLLLTRRSKSSKRLPPGGLGIPIIGQSISFLRAMRTNTAEQWLHQRIKKYGPVSKLSLFGKPTVFISGQSANKLVFTSDDNTISNQQTKSITMILGDRSIVELSGEDHKRVRGAILSFLRPDSLKKYVRIMDEEVREHLKIHWQGQQEVSVLPLMKTLTFNMICTLLFGIEKGIAREKYMASFRTLMRGIWSVPIDLPFSSFNKSLRESKRIQAMLKALIEEKKIKLEKEVDAPHQDLITHLLSLQKEGSNEELSEKEIVHNAIAVMMAGHDTTSVLLTFIMRLLAKDEAVYAAVLHEHEEIEKSKLPGEYLSWEDLNKMKYTWRVALEILRVVPPVFGGFRQALKDIEFDGYLIPKGWRIFWATPMTHMDESIFPEPSKFDPSRFENQSSASRLCFVPFGGGPRICPGNEFARIETLVAIHYIITHFTWKLSADDLFIRDPGPTPTKGLPIQITRRKAL 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48606310 48607981 + Bma026577.1 Bma07g01302 86439

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01302 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Bma07g01302 481 SUPERFAMILY Cytochrome P450 28 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PANTHER OS07G0520300 PROTEIN 18 477 - -
Bma07g01302 481 PANTHER CYTOCHROME P450 26 18 477 - -
Bma07g01302 481 Pfam Cytochrome P450 36 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 Gene3D Cytochrome P450 25 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01302 481 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01302 - - - tcc:18593563 637.491
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00694 Bma-Chr3:5866632 Bma07g01302 Bma-Chr7:48606310 3.77E-10 dispersed
Bma07g01302 Bma-Chr7:48606310 Bma11g00874 Bma-Chr11:32613453 5.42E-112 dispersed
Bma07g01302 Bma-Chr7:48606310 Bma07g01303 Bma-Chr7:48608795 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g493 Blo03g00567 . Bda07g00356 . . Bpe08g01128 . . . . . . . . . . . Bhi09g01888 . . . . . . . . . . . . . . . . . Lsi04g01209 . . . . . . . . . Bma07g01302 . . . . . . . . . . . . . . . . . Cla05g01495 Cam05g1612 . Cco05g1641 Clacu05g1593 Cmu05g1495 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma07g01302 Bma_Chr07 FPKM 0.041311 0.09446 0.0 0.0 0.0 0.0 0.0 0.034302 0.047113 0.028515