Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01303 ATGAACATCTACATAGCCATCTTCATCTTCTTCATTCCCATTCTCCTGCTACTTAAGAGAAGAAATAAATCATCCAAAAGGCTCCCTCCTGGTTCCTTCGGCATTCCCTTCATAGGCCAAAGCCTTACTCTTCTCCACGCTATGAGAAATAACACTGCAGAACAATGGCTCCGTCAAAGGATCAGAAAGTATGGACCAGTCTCCAAGCTCAGTCTCTTCGGCAAACCAACTGTTTTCATCAGTGGACAGGCTGCAAATAAGCTTGTTTTCGGCGGTGATGATGCCTCAGCCCTTAGCAACCAACAAGTCAAGTCCATTACCATGATTCTGGGTGACCGGAATTTGTTGGATCTCACCGGCGATGACCATAAACGAGTAAGAGACACTCTCCTTTCCTTCTTGAAACCCAATTCGCTGAAGAAATATGTCGGGAAAATTGACGAAGAAGTCAAGGAGCACCTCATGATCCATTGGCAAGGGAAGAATGAAGTCTCTGTACTACCCTTGATGAAGACTCTCACATTCAACGTGATATGCTCTGTACTATTCGGTGTCGAGAAAGGTATCGTAAGAGAGAAATACATGGAGTGTTTTCAAGCAATGCTAGAAGGAATGTGGTCCATTCCGATTAACTTGCCGTTTACTCACTACAACCGGAGCCTGCAGGCAACCGTGAAGGTCCAAGGCATGTTAAAGGGTCTTATGCAGGAGAAGAAAGTAAGACTTGAAGAAGACGTTGATTTTAAACAGCAAGACCTCATCACTTACATGCTCAGAATTCAAAAGGAAAGTAACAAAGAATTATTGAGTGAGACTGAAACCGTGCACAACGCCATAATCGTCATGATTGCAGGCTATGACACTACAGCTGTTCTGCTTACTTTCATGATGAAGCTTTTGGCTAAAGATCAAGCTGTTTATGCAGCCGTTCTTCAAGAACATGAAGAGATAGAAAAGAGCAAGCTACCTGGAGAGTCATTGACATGGGAAGATCTCAACAAGATGAAGTACACATGGAGAGTAGCTCTTGAAACGTTGAGGGTCGTCCCTCCGATTTTCGGTGGATTCAGACAAGTCTTGAAAGATATCGAATTCAATGGATATCTTATTCCAAAAGGATGGCAAATTTTCTGGGCGACGCCGATGACACACATGGACCAGAGCATATTTCCTGAGCCGTCGAAGTTTGATCCGAGTAGATTTGATGACCAAGCTTTGGTTCCTCGATTTTGCTTTGCGCCGTTCGGGGGAGGTCCGAGAATCTGTCCAGGCAATGAGTTTGCAAGGATAGAGACTCTTGTTGCCATCCACTACATCATAACTCACTTCACCTGGAAGTTATCTGCTGATGATCTTTTCATCAGAGATCCCATGCCAGTCCCAACTAGAGGATTACCTATTCAAATTACACAAAGGAAACCATTGCAGTTCAATCGAGAAATGTAG 1446 43.91 MNIYIAIFIFFIPILLLLKRRNKSSKRLPPGSFGIPFIGQSLTLLHAMRNNTAEQWLRQRIRKYGPVSKLSLFGKPTVFISGQAANKLVFGGDDASALSNQQVKSITMILGDRNLLDLTGDDHKRVRDTLLSFLKPNSLKKYVGKIDEEVKEHLMIHWQGKNEVSVLPLMKTLTFNVICSVLFGVEKGIVREKYMECFQAMLEGMWSIPINLPFTHYNRSLQATVKVQGMLKGLMQEKKVRLEEDVDFKQQDLITYMLRIQKESNKELLSETETVHNAIIVMIAGYDTTAVLLTFMMKLLAKDQAVYAAVLQEHEEIEKSKLPGESLTWEDLNKMKYTWRVALETLRVVPPIFGGFRQVLKDIEFNGYLIPKGWQIFWATPMTHMDQSIFPEPSKFDPSRFDDQALVPRFCFAPFGGGPRICPGNEFARIETLVAIHYIITHFTWKLSADDLFIRDPMPVPTRGLPIQITQRKPLQFNREM 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48608795 48610513 + Bma026578.1 Bma07g01303 86440

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01303 481 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Bma07g01303 481 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PANTHER CYTOCHROME P450 26 8 473 - -
Bma07g01303 481 Gene3D Cytochrome P450 17 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 SUPERFAMILY Cytochrome P450 21 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 Pfam Cytochrome P450 29 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma07g01303 481 PANTHER OS07G0520300 PROTEIN 8 473 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01303 - - - zju:107431816 649.432
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01303 Bma-Chr7:48608795 Bma11g00874 Bma-Chr11:32613453 6.09E-107 dispersed
Bma07g01302 Bma-Chr7:48606310 Bma07g01303 Bma-Chr7:48608795 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g491 . Blo03g01447 Bda07g00354 Bda09g00395 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01210 . . . . . . . . . Bma07g01303 . . . . . . . . Cpe14g00747 . . . . . . . . Cla05g01497 Cam05g1614 . Cco05g1643 Clacu05g1597 Cmu05g1496 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma07g01303 Bma_Chr07 FPKM 2.682796 0.0 1.089352 1.090776 4.384935 2.977395 2.983872 1.218707 1.165233 2.267995