Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01316 ATGGTCTCCCCAGAAAACGCTAACTGGCTCTACGACTATGGAGTGATCGAAGATATCTCTGTCCATGATAGGAATTTCTCCGTTTCAAATTCCGGGTTTTCTTGGCCCGTACAGGCTTTGAATTGCTCATCTAATATCAGCATGGAAATTGATGGATCATTGACAAATTCAGATTGCCCCAAGGAATCAAGCTCGAAAAAGAGGGTTAGATCTGAATCAAGTTGCTTATCCAGCTCCAAAGCATGTCGGGAGAAGTTGCGGAGAGATAAGCTGAATGACAAGAACATTTTCTATCTCTCTCTCTTTTTTTCTCTCTCTTCAGAGCCTTGGCCAGACACGCATACTCAGTTTCTGGAGTTGGGCGCTATTCTGGATCCTGGAAGACCACCTAAAGTAGACAAGGCTGCAATTTTGATCGACGCTGTCCGATTGGCCGAGAAAAGTGAGCTTCGAGACAAGAAGCAGAGGCTAAAGGCGGAAAAAGAGAAACTGGAGCTTCAATTGAAGAACATGAATGCTCAGCCCAGCTACCTCCCTCCACCACCCACAATTCCAGCTGCATTTGCTGCTCAAGGCCAAGCTCCCGGCAGTAAGTTGGTGCCTTTCATTACCTACCCTGGAGTTGCCATGTGGCAGTTCATGCCTCGTGCTGCAGTGGACACCTCACAAGATCATGTTCTCCGCCCACCAGTTGCTTAA 699 47.35 MVSPENANWLYDYGVIEDISVHDRNFSVSNSGFSWPVQALNCSSNISMEIDGSLTNSDCPKESSSKKRVRSESSCLSSSKACREKLRRDKLNDKNIFYLSLFFSLSSEPWPDTHTQFLELGAILDPGRPPKVDKAAILIDAVRLAEKSELRDKKQRLKAEKEKLELQLKNMNAQPSYLPPPPTIPAAFAAQGQAPGSKLVPFITYPGVAMWQFMPRAAVDTSQDHVLRPPVA 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48705388 48710276 - Bma026592.2 Bma07g01316 86453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01316 232 PANTHER BHLH TRANSCRIPTION FACTOR 1 97 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bma07g01316 232 PANTHER BHLH TRANSCRIPTION FACTOR 145 232 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bma07g01316 232 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 145 232 - -
Bma07g01316 232 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 115 144 - -
Bma07g01316 232 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 97 - -
Bma07g01316 232 PANTHER BHLH TRANSCRIPTION FACTOR 115 144 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bma07g01316 232 Coils Coil 143 174 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01316 Bma13g01026 CCT
Bma07g01316 Bma13g01026 ECH
Bma07g01316 Bma14g00357 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01316 Bma-Chr7:48705388 Bma13g01063 Bma-Chr13:43338811 2.04E-53 dispersed
Bma13g01026 Bma-Chr13:42866561 Bma07g01316 Bma-Chr7:48705388 2.20E-101 wgd
Bma14g00357 Bma-Chr14:4355988 Bma07g01316 Bma-Chr7:48705388 4.20E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01316 - - jre:109014401 263.462