Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01330 CAATCAAAGTACATGGTTGATCTAGAAGTTCAAATTCCAACTGCTTTCGATCCATTCGCCGAAGCCAAAGATACGGATGCTCCTGGAGCAAAAGAGTATGTTCACATCCGCGTTCAGCAAAGAAACGGTAAAAAGTGCCTGACCACAGTTCAGGGGCTGAAGAAAGAGTACAGCTACGAGAAGATTCTGAAAGATGTCAAAAAAGAGTTTTGCTGCAATGGAAATGTGGTGCAGGACAAAGAATTGGGGAAGATAATTCAACTCCAAGGTGATCAGCGCAAGAACGTTTCTCAGTTTCTTGTGCAGGCTGGTCTTGTGAAGAAGGATCATATCAAAATTCATGGTTTCTGA 351 42.74 QSKYMVDLEVQIPTAFDPFAEAKDTDAPGAKEYVHIRVQQRNGKKCLTTVQGLKKEYSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDHIKIHGF 116
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48813910 48814260 + Bma026606.1 Bma07g01330 86467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01330 116 CDD eIF1_SUI1 32 115 IPR005874 GO:0003743
Bma07g01330 116 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 5 116 - -
Bma07g01330 116 SUPERFAMILY eIF1-like 4 116 IPR036877 GO:0003743|GO:0006413
Bma07g01330 116 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 5 116 - -
Bma07g01330 116 ProSiteProfiles Translation initiation factor SUI1 family profile. 34 104 IPR001950 GO:0003743|GO:0006413
Bma07g01330 116 PIRSF Transl_init_SUI1_Euk 5 116 IPR005874 GO:0003743
Bma07g01330 116 Pfam Translation initiation factor SUI1 31 104 IPR001950 GO:0003743|GO:0006413
Bma07g01330 116 Gene3D - 1 116 - -
Bma07g01330 116 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 9 116 IPR005874 GO:0003743
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01330 Bma-Chr7:48813910 Bma14g00335 Bma-Chr14:4182271 1.48E-80 dispersed
Bma07g01330 Bma-Chr7:48813910 Bma07g01294 Bma-Chr7:48567148 7.87E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01330 K03113 - csv:101202908 214.542