Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01333 ATGGCAGGAACTGTTATGGCGGCCAATGGTAGCTCGACCGTGCTTAGACAAACCCCATCTTTGTGTCAAAACAGAGGTTCTAGTTCTACCTCTCTCAGAGATGTTGTGTCCATGGGAAATGGAAAATACTCCATGGGTCTTGATCTGTGGTATGGGCCAGACAGAGTGAAGTATTTGGGGCCATTTTCAGCTCAGACTCCGTCATATCTCACTGGCGAATTTCCGGTAATCCATGGGAGGTGGGCAATGCTCGGAGCTCTCGGCTGCATAACCCCAGAAGTCCTTGAAAAATGGCTCAAAGTAGACTTCAAAGAGCCAGTCTGGTTCAAAGCAGGATCTCAAATCTTCACAGAAGGAGGATTAGACTATCTGGGAAACCCTAATCTCGTTCATGCTCAAAGCATCCTCGCAGTTCTAGGCTTCCAAGTAATTCTAATGGGCCTGGTCGAAGGATACCGCATCAATGGCCTCGACGGAGTAGGAGAAGGAAATGACGTTTACCCAGGCGGCCAATATTTTGACCCACTTGGTCTAGCCGATGATCCAGTCACTTTTGCAGAGCTCAAAGTGAAAGAAATTAAAAATGGCCGCCTGGCAATGTTCTCCATGTTTGGATTCTTTGTCCAAGCCATTGTTACAGGAAAAGGCCCTCTTGAGAACCTCTTTGTGTCAAAACAGAGGTTCTAG 687 47.31 MAGTVMAANGSSTVLRQTPSLCQNRGSSSTSLRDVVSMGNGKYSMGLDLWYGPDRVKYLGPFSAQTPSYLTGEFPVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDVYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFVSKQRF 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48866479 48867561 + Bma026610.2 Bma07g01333 86470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01333 228 Pfam Chlorophyll A-B binding protein 76 210 IPR022796 -
Bma07g01333 228 Gene3D Chlorophyll a/b binding protein domain 75 226 - -
Bma07g01333 228 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 8 75 - -
Bma07g01333 228 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 76 222 - -
Bma07g01333 228 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 75 IPR001344 GO:0009765|GO:0016020
Bma07g01333 228 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 76 222 IPR001344 GO:0009765|GO:0016020
Bma07g01333 228 SUPERFAMILY Chlorophyll a-b binding protein 49 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01333 Bma-Chr7:48866479 Bma14g00298 Bma-Chr14:3713353 4.90E-147 dispersed
Bma07g01333 Bma-Chr7:48866479 Bma02g01306 Bma-Chr2:55191335 8.43E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01333 K08914 - gmx:100779387 392.889