Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01342 ATGACGGAGGTGTTGAATATGGCGGCCGATGAGTCAATCGATTCCCGCCGGGAGGGGAAGGAGAAGTCCGTTGAGGAACCCCACTCCTCGCCACCCCCGCCCCCAGTTAGAAGGTGGGAGAGAGACGACAAAGAACGGAGGGACGACCGGGATCTGGAACGCCCTCAGAATCGGCGCGGAGACATTTCTGATCGCAACCGCTCGCCGCCACTTCCCCCGCCTCTGAGGGAGAGAGACAGAGATAGGGATTATAAGCGCCGGAGCAGCCATAGCCCTCCTCCGCCTTATAGGGACAGGAAGCACTCGCCTCCTAGACGTTCATCTCCACCGCCTCATAAACGTTCGAGGAGGGATGATGGGGGTGGGTTTGAGGGAAGGAGGGGTAGTCCTAGAGGAGGATTCGGACCTGGTGACAGGAGGTTTGGATTTGATTATGGTGGAGGAAATGAGCGTGACATGCGAGGCAGGCCTGGGTATGCTGATGAAAGGCCCATGGGTCGGTTCATTGGTCGCTTATCTGGTGGTTATCAAGGTGGACCTTCCGAATGGGATACAAACCGCAGTTCTTACAATGATGTTCCCAACACTTTTAATGCTCCAAGGGAAGGTTTGATGTCTTACAAGCAATTTATGCAGGAGCTGGAGGATGATATACTACCAGCTGAAGCTGAGCGCAGATATCAGGAATATAAGTCTGAGTATATTTCAACTCACAAGCGTGTTTTCTTTGATGCTCATAAAGACGAGGAATGGTTGAAAGACAAATATCATCCTACAAACCTTGTTTCTGTTATTGAAAGGAGAAATGAACTTGCTAGAAGGGCTGCAAAGGAATTTCTGCTTGATCTGCAAAGTGGAACACTGGACTTAGGTCCTTCTATTAATGCCTCATCTTCAAGTAAACCAGGTCAAACTAGTGAACCAAACTCTGATGAAGACATAGAAAATGATGGAAAAAGAAGACGATATGGAAAAGGACAAACAAAAGAATCTGATTCACTATCAGCTGCTCCTAAGGCTCATCCAGTGAGCTCTGAACCTAGAAGAATCAGACTTGATATTGAACAAGCGCAGGTCATTATAGGTAAGCTTGACATGGAGAAAGGAATTGGAGAAAATGTTTTATGTCGAACGGAAAGTGACAAAATTAGTAGGGATAAATCACATAGCGGATCCTATGGTCCAGTCATCATAGTAAGGGGTTTGACGTCTGTTAAGGGTCTCGAAGGCATTGAGCTATTAGATACACTTATCACATATCTTTGGCGCATACATGGAGTAGATTATTATGGAATGGTTGAAACAAGAGAAGCTAAGGGCTTCAGGCATATAAGACCAGAAGGAAAGAGTTCCGATACTGTTGGTAATGGAGTTGAGTGGGAAAAGAAGCTTGATTCATATTGGGAAGAGAGGTTAAAGGGTCAAGATCCTTTGGAAATTGCGACAGGTAAAGAGAACATAGAGGCCACTTCTCTTGAAGCCTTTGATCCTTACATTCGGAAGATTAAAGATGAAAAGTATGGGTGGAAGTATGGGTGTGGAGCTAAAGGTTGCACCAAGCTTTTTCATGCTCCCGAGTATGTGCACAAGCATTTAAAATTGAAACACCCTGATCTTGCAGTGGAGTTGACATCCAAAGTATGTGAAGACCTTTATTACCAGAACTACATGAATGATGCAGATGCACCTGGTGGAACTCCTGTTATGCAACAACCTCTTCCGAAGGACAAGCTACAAAGAAGAAGGATGGCTTTAGAGAATCGATTGAAAGATGATCGCGGTAATCGGAGAGAGCGTGATATCCGAGCAGGTGCTGGAGAAAGATGTGAAAGAAGTGGGGCAGATGAATCCAACAATGATGACACGGATGGAGGAAACCGTGATGAACCCATTTATGATAGTTTTGGTGGACAAGGAATAGCTGTCCCTTCCTTTTCCTCGGATATTCCTCCTCCAGTATTGATGCCTGTTCCTGGGGCCGGACCATTAGGGCCTTTTGTTCCTGCCCCACCTGAAGTCGCAATGCGGATGTTGAGGGAACAAGGGGGTCCAGCTCCTTTTGAAGGCGCTGGAAGAAATGGGAGATCTACATCCCAGTTAAATGGACGAGCCCCAATTCTTGCCTTATCCTCAGGCTTCCGTCAAGATCCTCGTGGCTTACGGAGTTATCAAGACTTGGACGCCCCTGAGGATGAAGTAACAGTGATAGATTATAGAAGCTTATAG 2226 46.59 MTEVLNMAADESIDSRREGKEKSVEEPHSSPPPPPVRRWERDDKERRDDRDLERPQNRRGDISDRNRSPPLPPPLRERDRDRDYKRRSSHSPPPPYRDRKHSPPRRSSPPPHKRSRRDDGGGFEGRRGSPRGGFGPGDRRFGFDYGGGNERDMRGRPGYADERPMGRFIGRLSGGYQGGPSEWDTNRSSYNDVPNTFNAPREGLMSYKQFMQELEDDILPAEAERRYQEYKSEYISTHKRVFFDAHKDEEWLKDKYHPTNLVSVIERRNELARRAAKEFLLDLQSGTLDLGPSINASSSSKPGQTSEPNSDEDIENDGKRRRYGKGQTKESDSLSAAPKAHPVSSEPRRIRLDIEQAQVIIGKLDMEKGIGENVLCRTESDKISRDKSHSGSYGPVIIVRGLTSVKGLEGIELLDTLITYLWRIHGVDYYGMVETREAKGFRHIRPEGKSSDTVGNGVEWEKKLDSYWEERLKGQDPLEIATGKENIEATSLEAFDPYIRKIKDEKYGWKYGCGAKGCTKLFHAPEYVHKHLKLKHPDLAVELTSKVCEDLYYQNYMNDADAPGGTPVMQQPLPKDKLQRRRMALENRLKDDRGNRRERDIRAGAGERCERSGADESNNDDTDGGNRDEPIYDSFGGQGIAVPSFSSDIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPAPFEGAGRNGRSTSQLNGRAPILALSSGFRQDPRGLRSYQDLDAPEDEVTVIDYRSL 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48971593 48979330 + Bma026620.1 Bma07g01342 86479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01342 741 MobiDBLite consensus disorder prediction 290 309 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 575 628 - -
Bma07g01342 741 Pfam SERRATE/Ars2, N-terminal domain 208 289 IPR021933 -
Bma07g01342 741 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 741 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 10 27 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 687 722 - -
Bma07g01342 741 ProSitePatterns Zinc finger C2H2 type domain signature. 513 536 IPR013087 -
Bma07g01342 741 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 741 IPR039727 GO:0006397
Bma07g01342 741 MobiDBLite consensus disorder prediction 559 631 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 35 105 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 290 348 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 144 161 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 1 196 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 179 196 - -
Bma07g01342 741 Pfam Arsenite-resistance protein 2 448 640 IPR007042 -
Bma07g01342 741 Coils Coil 575 595 - -
Bma07g01342 741 MobiDBLite consensus disorder prediction 312 328 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01342 Bma14g00814 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01342 Bma-Chr7:48971593 Bma07g01347 Bma-Chr7:49023474 0 proximal
Bma14g00814 Bma-Chr14:9049163 Bma07g01342 Bma-Chr7:48971593 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01342 - - csv:101219335 1029.24