Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g01373 | ATGGCTGGGGGATCTTCCGATCAGAACTCGAACATTCCGATTCCTCCGTCCGATTCTCCCACCTCTGCTGACTTCAATACCGATCAGCTTCCTTTCACTAGCCACACATCCAACAACTACTCTGACGAAGAGGAGGCGGCGGTCGATCCTAATATTATTCTTGATGAGCCAAATGATGCTGAAGAAGAAGCCGAGGAGGACGGAGAGGATCTCTACAACGATAATTTTATGGACGATTACCGGAGGATGGAGGAACATGACCAATATGAATCCTTGGGTCTCAATGACTCTGTGGAAGACGAGAGAGATTTGGATCAAATTATGGAAGATCGAAGGGCTGCTGAATTGGAGCTCGACGCACGAGATGGTCGCTCCACCCAGCGCAAACTTCCACAGCTACTTCATGATAATGACTCTGAGGATGACAACTCTAGGCCGCCAAAGAGAGCTAGGGCTTCTAGGCCTTCAGCTGCAGCAAGAAGTTATGATGATGTTGATGGAATGCAAAGTTCACCTGGAAGGTCACAGCAAGATCATTCTAGAGACGATATCCCCATGACTGATCATTCAATTGATGAACAGTATGAGGATGAAGATGACGATGAAGGTGAGTTTGAAATGTATAGGGTCCAAGGAACTCTAAGAGAGTGGGTAACTAGGGATGAAGTTCGTCGCTTCATTAGCAAGAAATTCAAAAATTTCTTAGAAACATATGTGAATCCAAAAAATGGACATTCTGAGCTCGTATACATGCGGCTCATAAATGAGATGGTGTTGGCTAACAGTAGTAGCTTGGAGGTAGATTATAAGCAGTTTATTTATGTACATCCAAATATTGCCATCTGGTTGGCTGATGCCCCACAATCTGTCCTAGAAGTCATGGAAGAAGTTGCAAAGAAGGTAGTATTTGACATACATCCTAATTACAAGAGTATTCACCAGAAGATCTATGTGAGGATAACCAACTTACCTGTATATGATCAGATTCGAAACATTAGGCAAATCCACTTGAATACCATGATTCGTATTGGAGGGGTTGTGACTCGCCGATCTGGTGTTTTTCCCCAGCTGCAGCAGGTCAAATATGATTGCAACAAATGTGGGGCAATATTAGGGCCCTTTTTCCAGAATTCGTATTCAGAAGTCAAGGTTGGTTCTTGCCCTGAATGCCAATCAAAAGGGCCATTCACTGTTAATGTTGAACAGACTTTATACAGGAACTACCAGAAGCTTACGCTGCAAGAAAGCCCTGGTATTGTTCCTGCAGGTCGTCTTCCAAGATACAAGGAAGTGATATTGTTGAATGATCTGATTGATTGTGCCCGCCCTGGGGAAGAAATTGAAGTCACAGGAATTTATTCAAATAACTTCGATTTATCTTTAAATACAAAGAATGGATTTCCTGTCTTTGCTACTGTTGTTGAAGCAAACTACGTTACCAAGAAGCAAGACCTCTTCTCTGCTTACAAACTTACTCAGGAAGACAAAGAAGAGATTGAAAAGCTTGCTAAAGATCCAAGAATTGGAGAAAGGATTATCAAATCTATTGCTCCATCAATATATGGTCATGAGGATATCAAAACGGCCATAGCTCTTTCTATGTTCGGTGGTCAAGAGAAGAATGTTGAAGGGAAACATCGGTTAAGAGGTGACATCAATGTACTTCTTCTTGGAGATCCAGGAACCGCAAAGTCACAATTTCTGAAATATGTTGAAAAGACTGGTCAAAGAGCAGTGTACACCACAGGCAAAGGAGCTTCTGCTGTTGGACTCACAGCAGCTGTGCACAAGGACCCAGTTACAAGGGAATGGACCCTTGAGGGAGGTGCCCTTGTTTTGGCTGATAAAGGAATTTGTCTTATTGACGAGTTTGACAAGATGAATGATCAAGATCGGGTGAGTATCCATGAAGCAATGGAGCAGCAAAGCATTAGTATATCGAAGGCTGGGATAGTCACTTCTCTTCAAGCACGTTGTGCCGTCATTGCTGCAGCTAATCCCATCGGAGGAAGGTATGATTCCTCAAAAACAATTACCCAGAATGTTGAGCTGACTGATCCTATCATTTCTCGTTTTGACATCCTATGTGTAGTGAAGGATGTCGTAGATCCTGTTATAGACGAGATGCTTGCCAAGTTTGTTGTTGATAGTCATTTTAAATCACAGCCTAAGGGTTCTAATGTTGAGGATAAGTCCAATATTAAGGAGTCTGAGGATGACATGCAAGACTCTGATAGGCCAGTTGATGTTGAGGTGCTGTCTCAGAATCTGCTTAAAAAATATATAACTTATGCAAAGTTAAATATTTTTCCAAGGTTGCATGATGCTGATATGGATAAGCTCACACACGTTTATGCTGAGCTGCGGCGCGAATCATCTCACGGACAAGGAGTTCCAATTGCAGTGAGACACATAGAATCAATGATACGGATGTCTGAGGCGCACGCAAGAATGCACCTCAGGCAGCATGTTACACAAGAAGATGTGGATATGGCAATTCGAGTACTTCTTGATTCGTTCATTTCAACACAAAAATTTGGGGTTCAGAAAGCACTGCAAAAGAGCTTCAGAAAGTATATGACTTTCAAAAAGGATTACAATGAACTACTCCTGCATCTCCTTCGTGAGCTCGTGAAGAATGCATTGCACTCAAAGGAAATAGTTTCCGGTTCTGTTGCCGGACTTACCCATATTGATGTGAAAGTAGAGGATTTGCTAACCAAGGCACAGGAACACGAAATATATGATCTTAATCCTTTTTTCTCAAGTACTCATTTTTCTAGAGCCAACTTTACGTTGAACGAAGAACATGGAGTAATTTACCATCAACTTGCGAGATAA | 2841 | 42.2 | MAGGSSDQNSNIPIPPSDSPTSADFNTDQLPFTSHTSNNYSDEEEAAVDPNIILDEPNDAEEEAEEDGEDLYNDNFMDDYRRMEEHDQYESLGLNDSVEDERDLDQIMEDRRAAELELDARDGRSTQRKLPQLLHDNDSEDDNSRPPKRARASRPSAAARSYDDVDGMQSSPGRSQQDHSRDDIPMTDHSIDEQYEDEDDDEGEFEMYRVQGTLREWVTRDEVRRFISKKFKNFLETYVNPKNGHSELVYMRLINEMVLANSSSLEVDYKQFIYVHPNIAIWLADAPQSVLEVMEEVAKKVVFDIHPNYKSIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGAILGPFFQNSYSEVKVGSCPECQSKGPFTVNVEQTLYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYSNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHEDIKTAIALSMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADKGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCAVIAAANPIGGRYDSSKTITQNVELTDPIISRFDILCVVKDVVDPVIDEMLAKFVVDSHFKSQPKGSNVEDKSNIKESEDDMQDSDRPVDVEVLSQNLLKKYITYAKLNIFPRLHDADMDKLTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNELLLHLLRELVKNALHSKEIVSGSVAGLTHIDVKVEDLLTKAQEHEIYDLNPFFSSTHFSRANFTLNEEHGVIYHQLAR | 946 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 49350150 | 49355488 | + | Bma026656.1 | Bma07g01373 | 86510 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g01373 | 946 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 146 | 939 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | ProSitePatterns | MCM family signature. | 617 | 625 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
Bma07g01373 | 946 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 518 | 843 | IPR027417 | - | |
Bma07g01373 | 946 | ProSiteProfiles | MCM family domain profile. | 508 | 714 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | Pfam | MCM AAA-lid domain | 757 | 840 | IPR041562 | - | |
Bma07g01373 | 946 | MobiDBLite | consensus disorder prediction | 720 | 746 | - | - | |
Bma07g01373 | 946 | Pfam | MCM N-terminal domain | 229 | 322 | IPR027925 | - | |
Bma07g01373 | 946 | PANTHER | DNA HELICASE | 146 | 939 | - | - | |
Bma07g01373 | 946 | SMART | mcm | 325 | 841 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | MobiDBLite | consensus disorder prediction | 723 | 742 | - | - | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 549 | 564 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 637 | 650 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 688 | 696 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 661 | 673 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 609 | 623 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | MobiDBLite | consensus disorder prediction | 55 | 73 | - | - | |
Bma07g01373 | 946 | Pfam | MCM OB domain | 328 | 455 | IPR033762 | - | |
Bma07g01373 | 946 | MobiDBLite | consensus disorder prediction | 1 | 202 | - | - | |
Bma07g01373 | 946 | Pfam | Mini-chromosome maintenance protein 2 | 43 | 200 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
Bma07g01373 | 946 | Gene3D | - | 488 | 863 | IPR027417 | - | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 338 | 355 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 457 | 468 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 361 | 373 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 396 | 410 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
Bma07g01373 | 946 | PRINTS | Mini-chromosome maintenance (MCM) protein 2 signature | 472 | 483 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
Bma07g01373 | 946 | SUPERFAMILY | Nucleic acid-binding proteins | 230 | 477 | IPR012340 | - | |
Bma07g01373 | 946 | Gene3D | - | 356 | 406 | - | - | |
Bma07g01373 | 946 | CDD | MCM2 | 511 | 839 | - | - | |
Bma07g01373 | 946 | MobiDBLite | consensus disorder prediction | 74 | 149 | - | - | |
Bma07g01373 | 946 | MobiDBLite | consensus disorder prediction | 176 | 191 | - | - | |
Bma07g01373 | 946 | Pfam | MCM P-loop domain | 496 | 718 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma07g01373 | 946 | Gene3D | - | 221 | 325 | - | - | |
Bma07g01373 | 946 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Bma07g01373 | 946 | Gene3D | - | 329 | 454 | IPR012340 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g01647 | Bma-Chr4:52347896 | Bma07g01373 | Bma-Chr7:49350150 | 1.04E-56 | dispersed | |
Bma07g01373 | Bma-Chr7:49350150 | Bma01g00291 | Bma-Chr1:2423821 | 3.48E-94 | dispersed | |
Bma07g01373 | Bma-Chr7:49350150 | Bma03g00566 | Bma-Chr3:4689080 | 8.64E-92 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g01373 | K02540 | - | vvi:100266163 | 1565.82 |