Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01423 ATGGGGGTTTCTGGGAAATGGATAAGAGCACTTGTTGGTTTAAAGAAATCTGAAAAGTCACAATCTTCTGAAAAAAATCAAAACAAGACACCTGGTAGCAAGTTCAGACATCACAGAAAGCACTCTCTTGAGGTTGATGCAGATAAACTTCGGGCCGAATTGGATCCAAATAGCAGCACATTAGTTGGGGATGCTAATACTCATACTGATCGATATCCTGCTGGTTTGCCTTCAAATTCGCTTCATTTACTTGACATTTCACAGAATCCTCAGAATGAAAGAGAGAAGTTGGCTGCCATACGAATCCAAACAACCTTTCGAGGATTTCTGGCTAGGAGAGCTCTCAGAGCTTTGAAAGGATTAGTGAGGCTTCAAGCTCTTGTCAGGGGTCATGCTGTCAGAAAGCAAGCAGCAATTACACTACGATGTATGCAAGCTTTAGTGAGAGTTCAGGCTCGGGTCAGAGCAAGGCGTGTTCGTCTCGCACTAGAAAGTGAAACTTCTCAACAAAAGCTTCAACAACAACTTGAAAATGAGGCTCGTGTTAGAGAAATAGAGGAAGGGTGGTGCGACAGTGTAGGATCTGTTGAAGAGATTCAAGCCAAGCTGTTAAAGAGGCAGGAGGCTGCAGCCAAGCGCGAGAGAGCCATGGCATATGCTATGGCTCATCAGTGGCAAGCAAGTTCAAGGCAGCAAACTGCTCCATCCGGGTTTGAACCTGATAAAAACAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCCGTTCGTCCTTGGGAAAATCGTTTTCTTGACATTAATCTCCGAGATGGAGTGATGATAAGAGAGAAAGAATCGGCGGAGGCTAGAAATAACACTGGATCTCAGTTGAAAGGTAGTGGGAAGAAGCCAAACGTTTCAACTGCACAATCTAACCTCTCAAACCAGAAAACACGCCCGTCTAATTCTGAAGGTTCCAGTTCTTCTCCCAGTAAATCAGCAGGCATGGTAGAGCCAATGGCTGCCCAGTTCTCAAACCCAAAGTCCAAGCCTTCTCATGCAAAGACCGCCGAAGAAGTTAAAAAACCAGTTGTTGGATCAAGATCCATTAGTAACCCAAAAGAGCGATCCACTCAGTCTGAGAAACAGGCGAAAAAGCGGCTATCTCTGCCTAACAACGGTGAGCTCTTTCTCTCTCCCCCATACAATCATTAG 1194 45.23 MGVSGKWIRALVGLKKSEKSQSSEKNQNKTPGSKFRHHRKHSLEVDADKLRAELDPNSSTLVGDANTHTDRYPAGLPSNSLHLLDISQNPQNEREKLAAIRIQTTFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESETSQQKLQQQLENEARVREIEEGWCDSVGSVEEIQAKLLKRQEAAAKRERAMAYAMAHQWQASSRQQTAPSGFEPDKNSWGWNWLERWMAVRPWENRFLDINLRDGVMIREKESAEARNNTGSQLKGSGKKPNVSTAQSNLSNQKTRPSNSEGSSSSPSKSAGMVEPMAAQFSNPKSKPSHAKTAEEVKKPVVGSRSISNPKERSTQSEKQAKKRLSLPNNGELFLSPPYNH 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 50036173 50039353 + Bma026713.1 Bma07g01423 86560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01423 397 MobiDBLite consensus disorder prediction 279 397 - -
Bma07g01423 397 MobiDBLite consensus disorder prediction 283 327 - -
Bma07g01423 397 SMART iq_5 94 116 IPR000048 GO:0005515
Bma07g01423 397 SMART iq_5 117 138 IPR000048 GO:0005515
Bma07g01423 397 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Bma07g01423 397 Gene3D - 92 142 - -
Bma07g01423 397 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Bma07g01423 397 MobiDBLite consensus disorder prediction 14 49 - -
Bma07g01423 397 Pfam IQ calmodulin-binding motif 98 116 IPR000048 GO:0005515
Bma07g01423 397 PANTHER IQ-DOMAIN 5-RELATED 2 388 - -
Bma07g01423 397 PANTHER IQ-DOMAIN 5-RELATED 2 388 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01423 Bma11g00338 CCT
Bma07g01423 Bma14g00379 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01643 Bma-Chr4:52333556 Bma07g01423 Bma-Chr7:50036173 6.08E-37 dispersed
Bma07g01423 Bma-Chr7:50036173 Bma08g01144 Bma-Chr8:50511458 5.04E-42 dispersed
Bma01g00921 Bma-Chr1:8982641 Bma07g01423 Bma-Chr7:50036173 1.20E-43 transposed
Bma01g02209 Bma-Chr1:79004323 Bma07g01423 Bma-Chr7:50036173 5.71E-59 transposed
Bma04g00236 Bma-Chr4:2044203 Bma07g01423 Bma-Chr7:50036173 2.52E-12 transposed
Bma04g00927 Bma-Chr4:12995086 Bma07g01423 Bma-Chr7:50036173 4.58E-18 transposed
Bma10g00484 Bma-Chr10:5714220 Bma07g01423 Bma-Chr7:50036173 5.07E-27 transposed
Bma11g01010 Bma-Chr11:45765929 Bma07g01423 Bma-Chr7:50036173 3.12E-40 transposed
Bma14g00379 Bma-Chr14:4537470 Bma07g01423 Bma-Chr7:50036173 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01423 - - pvy:116125522 494.197