Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma07g01446 | GCAGCAGTTTTTGACATGGAGTATACCAGATGGCAAGAGAATTATCACCAGCACATGATGGAGCTCCGATCCGAGTTGCAGGAGCATTTATCAGATGATGATCTCCGATCAACGGTAGACGATTACGTTTCTCGTTATGATGAAATTTCCCATCTACAAGGGGTGGCAACCAAATCCGACGTCTTCCATCTTGTTAAGATTAGACGCCCGAATTCAACCTACCGATGTTTTCACAGGATGGGTGGCTTCAGACCCTCTGAACTCATCAAGATGTTAATGACACAATTAGAGCCACTAAGTGAACAGCAAGTGATGGGAATAAACATTCTAACCAGCAGGCCGAGGAGGCTGTCCCAAGGCCAAGAACAACTCCAGCAATCTCTCATAGACACCATAGCCGGAGGACCCATCATCGACAGCCTGAACCTGATGTTGGTAGCCGTCGGCAAATTTTCCAATCTCGAAGAGTTCGTTCGACATCCCATCGAAATGATTCCAGGCAATATTTTGAGGCAGCAAACACTTCATCAATTATGTCGATTACTAACAAGCCAACAAGAAGCACAATGTTTTGTCATGATCGGAGAATATTACAGCAGACTACTCTGTGTGGGCGTCTCAGCCCCGAGAGTAGTTTAG | 639 | 45.85 | AAVFDMEYTRWQENYHQHMMELRSELQEHLSDDDLRSTVDDYVSRYDEISHLQGVATKSDVFHLVKIRRPNSTYRCFHRMGGFRPSELIKMLMTQLEPLSEQQVMGINILTSRPRRLSQGQEQLQQSLIDTIAGGPIIDSLNLMLVAVGKFSNLEEFVRHPIEMIPGNILRQQTLHQLCRLLTSQQEAQCFVMIGEYYSRLLCVGVSAPRVV | 212 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 50182347 | 50183402 | + | Bma026739.1 | Bma07g01446 | 86583 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma07g01446 | 212 | Pfam | Seed dormancy control | 18 | 93 | IPR025422 | GO:0006351|GO:0043565 | |
| Bma07g01446 | 212 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 201 | - | - | |
| Bma07g01446 | 212 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 201 | - | - | |
| Bma07g01446 | 212 | ProSiteProfiles | DOG1 domain profile. | 1 | 211 | IPR025422 | GO:0006351|GO:0043565 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma07g01446 | Bma-Chr7:50182347 | Bma04g01459 | Bma-Chr4:50090361 | 5.13E-46 | dispersed | |
| Bma11g00226 | Bma-Chr11:2012367 | Bma07g01446 | Bma-Chr7:50182347 | 2.68E-76 | wgd | |
| Bma14g00412 | Bma-Chr14:4841704 | Bma07g01446 | Bma-Chr7:50182347 | 9.02E-81 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma07g01446 | K14431 | - | rcu:8271908 | 224.557 |