Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01468 ATGACTCTGACTCCATCGCCGCATTTCCTTCAAGTTCCAGTTCACTCGATCTATCCATCGTCTCACTGTCTACTTTACGCCGACGCTGTCTCTGTATCAAGCTTTTTTTCTCAATACGCATGTCTTCCTTCTCTGACTGCCGCGCGGAGCGGGGTCTCGTTGGTCCCAACTGTAGTGAAGGCCTCGTCCAGAGTGAAACGTTTCGCTAAGTCCGCAGAGGAGGAGAAGTTATGTGGATCGGAAATTCTACCTGCCGAAGTTGGCGGAAGGAGGGAGCTTGACGATGAGAGTGCCGCTCCATATCAAAGTTCGGAATCCGTTACTCTTCCTGCGCAGAGGATTCTTCCGTCATCGTCGAGTGATTCACTTTTGCTTGGGATTCGAGAGCCGGTTTATGAGGTGCTAGAAGTGAAATCAAATGGATCGGTATCCACTCAAAAGATTAACAGGCGTCAGTTGTTGAAGTTGAGTGGTCTTCGCCCGCGTGATATCCGGAGTGTAGATCCTTCTTTGTTTTTGACAAACTCGATGCCTTCATTGTTGGTCCGTGAGCATGCTATTTTGCTTAATCTGGGATCTTTGCGAGCAATAGCAATGAAGGAGTGTGTCCTCATATTTGACTATAACTGTAAAGGAGGGCAAGCTTTTATTGAGTCACTATTGCCTCGGTTGAACCCAAAAAGCATGAATGGGGGGACATCAATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTGTCACGAACACAGAGGTTAGAGCAGAGACTAATGAATGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTTTTGCCTACCAAATTAACTGCTGATGTATTGGAACAACTTCGCATTAGCAAGCAGACCTTGGTTGAACTGGGATCCAGAGCAGGGGCACTCAGACAAATGCTGCTTGATCTTTTGGAGGATCCTCATGAAATACGTCGCATTTGCATCATGGGGAGAAACTGTATATTGAAGAAAGGAAGTGAAGAAGTTGAGTGTTCTGTCCCTCTAGAAAAACAAATTGCTGACGAAGAAGAGGAAGAAATTGAGATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAGGCTGAAAGACTTCTGGACTCTGCAAAAGAAATGGAAGATTCTATTGCTGTCAATTTGAGCTCAAGGAGGTTGGAGGTCAGCAGAGTCGAACTACTTCTTCAAGTAGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGTATCTTTGGCATGAACCTAAGGTCATATCTTGAGGAGCATGTGATTGCCTTTTGGACTACTACAGCAGGGATCATAGTTGGTGGTATTGTGGCATTTTTACTCATGTATTATTATCTCAGGGCAAGAAGGGTATTATAA 1386 44.95 MTLTPSPHFLQVPVHSIYPSSHCLLYADAVSVSSFFSQYACLPSLTAARSGVSLVPTVVKASSRVKRFAKSAEEEKLCGSEILPAEVGGRRELDDESAAPYQSSESVTLPAQRILPSSSSDSLLLGIREPVYEVLEVKSNGSVSTQKINRRQLLKLSGLRPRDIRSVDPSLFLTNSMPSLLVREHAILLNLGSLRAIAMKECVLIFDYNCKGGQAFIESLLPRLNPKSMNGGTSMPFELEVVEAALLSRTQRLEQRLMNVEPRVQALLEVLPTKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCILKKGSEEVECSVPLEKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVIAFWTTTAGIIVGGIVAFLLMYYYLRARRVL 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 50336108 50340678 + Bma026761.1 Bma07g01468 86605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01468 461 Coils Coil 341 361 - -
Bma07g01468 461 Gene3D - 127 208 - -
Bma07g01468 461 Pfam CorA-like Mg2+ transporter protein 343 456 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bma07g01468 461 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 43 461 - -
Bma07g01468 461 CDD Mrs2_Mfm1p-like 134 460 IPR039204 -
Bma07g01468 461 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 43 461 IPR039204 -
Bma07g01468 461 Gene3D Magnesium transport protein CorA, transmembrane region 209 392 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01468 Bma-Chr7:50336108 Bma12g00023 Bma-Chr12:735368 2.22E-18 dispersed
Bma07g01468 Bma-Chr7:50336108 Bma13g00660 Bma-Chr13:16386481 6.75E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01468 K16075 - jre:109001084 607.446