Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01474 ATGTTTAATCAGTTCGAAGCTTCTGCAAACCCACTAATGCAGCTCCAAGGCTTTGATTTGGAGCTGCATGATTTCATAGCCAGTCCTAACTTCGACCAGTTTGTCGATCTAATCAGAGGAGAAAACGAAAACCCAGTTTATGATGGGTGTTTTGCAGATGATCAGTTTGGTCCGTCGAACCCAGGAGATATCTTGGATTTCAATGGCGTTCCTAGATCAGACGGCCAAGACTTTATGATGTTTAACAGATTGGAGAGATTTGATGATGGAGAAGTGATCAAGGGAGGGGAAGAAGATGATGAGAATGATGAGGAGGATTCTTCTGCTACGACTACGACAGTGAAGAATGAAACGACGGCGAAGGGGGCCGACAGATCGAGAACTTTGATTTCAGAGAGACGAAGAAGAGGGAGGATGAAAGAGAAGCTTTATGCACTGCGTTCATTGGTTCCAAACATAACCAAGATGGATAAAGCCTCCATTGTTGGAGATGCTGTATTATACGTGCAAGAGCTGCAAATGCAGGCCAAAAAACTCAAGGCTGAGATAAAGAGCATAGAAGAAACGATTAAAAGATTCAGTCGGATTCCTCGTTCTACCAGTTTGGTTCCAAAGAAAATCACTCAGATGGATATTTTTCAGGTCGAGGAAAGAGGGTTTTACTTGAGGATAGTATGCGAGAGAGGAGATGGAGTAGCCAGGTCTCTTTACAAAGTTGTTGAATCTATGAGGGGCTTTAATGTTCAGTGCTCAAATTTGGCGACTCAGACTCAAACATTTGTTTTGACTGCAACTCTCAACGTGGTGAAAGATTGTGAGCAGGAGATGCACTTGCCAAGTTTGAAGGTTTGGTTGACGGGAGCTCTTCTGAACCAAGGATTTGAATTTAAACAACCTTTCCCCAACTTGTAG 912 43.09 MFNQFEASANPLMQLQGFDLELHDFIASPNFDQFVDLIRGENENPVYDGCFADDQFGPSNPGDILDFNGVPRSDGQDFMMFNRLERFDDGEVIKGGEEDDENDEEDSSATTTTVKNETTAKGADRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQELQMQAKKLKAEIKSIEETIKRFSRIPRSTSLVPKKITQMDIFQVEERGFYLRIVCERGDGVARSLYKVVESMRGFNVQCSNLATQTQTFVLTATLNVVKDCEQEMHLPSLKVWLTGALLNQGFEFKQPFPNL 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 50374715 50376549 - Bma026766.1 Bma07g01474 86611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01474 303 Coils Coil 169 196 - -
Bma07g01474 303 MobiDBLite consensus disorder prediction 91 132 - -
Bma07g01474 303 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 87 296 - -
Bma07g01474 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Bma07g01474 303 PANTHER TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR 87 296 - -
Bma07g01474 303 SMART finulus 129 178 IPR011598 GO:0046983
Bma07g01474 303 Pfam Helix-loop-helix DNA-binding domain 128 173 IPR011598 GO:0046983
Bma07g01474 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 193 IPR036638 GO:0046983
Bma07g01474 303 Gene3D - 120 196 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01474 Bma11g00199 CCT
Bma07g01474 Bma07g00170 CCT
Bma07g01474 Bma14g00439 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01474 Bma-Chr7:50374715 Bma11g00703 Bma-Chr11:16745683 7.83E-18 dispersed
Bma11g00199 Bma-Chr11:1770220 Bma07g01474 Bma-Chr7:50374715 1.46E-101 wgd
Bma14g00439 Bma-Chr14:5095538 Bma07g01474 Bma-Chr7:50374715 5.00E-133 wgd
Bma07g00170 Bma-Chr7:2274279 Bma07g01474 Bma-Chr7:50374715 1.84E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57673 PF00010 HLH 3.80E-09 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01474 - - tcc:18590468 289.271