Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01477 ATGGAGAAATCTGGGTATGGCCGCGATGGCGTTTTCAGGTCTCTTAGACCCCCACTTGTCCTTCCCCAAGATCCTGACCTCTCTATGGTTTCCTTCCTCTTCAGAAACTCTTCCTCTTACTCGCACAAACCTGCCCTCATCGATGCCGATGGTTCTGAGACCCTGTCGTTTTCCCAGCTCAAATCCATGGTGATTAAGGTCTCCCATGGCTTACTTCATCTGGGTATTAAGAAGAACGACGTTGTACTGATCTTCGCCCCCAATTCAATCCAATTTCCGATCTGTTTCCTCGGAATTATAGCCGTCGGAGCTATTGCGACAACTTGTAATCCGATTTACACTCTCTCTGAACTGACAAAGCAAGTTAGAGATTCGAAACCGAAGCTCGTAATTACAGTTGCTGAGTTATGGGACAAAGTGATGAATTTCAATCTCCCGACAGTGTTACTCGGACCAGAAGGGTCATTTCCGTCAATATCATCGAATTTGAAGATTCTAACCTTCCATGATTTGGTCCAATTAGGCCGGTCGGAGTCCCATTTTCCGGCGGTGAAAATCAAGCAGACAGACACAGCTGTGCTATTGTACTCATCAGGAACAACAGGTACTAGTAAGGGGGTGATTCTATCTCACAGAAATTTCATATCGGCGTCTCAAATGATTGTATCGGACCAAATAATGGCTGGGGAAATGCACAATATTTTTCTCAACGTTTTGCCTCTATTTCATGTTTTTGGACTGTGTTGTATTACATTTTCACAGCTTCAGAAAGGCAATGCTGTTGTGATAATGTCTAAATTTGAATTTGAAAAGTTGCTATCGGCGGTGGAGAAGCACAAGGTCACTGATTTGTGGATTGTGCCTCCAATCGTGCTGGCTTTGGCCAAGCAAAGTGTGGTTAAGAAGTATAATCTTTCCTCATTGAGGCATATAGGTTCTGGGGCTGCACCTTTGGGCAAAGATTTAATGGAGGAATGTGCTAAGAACATTCCCACTGCTCAGGTTATTCAGGGATATGGTATGACTGAAACTTGTGGAATCATCTCTGTGGAGAACCCGGATGTGGGAATTCGAAATACCGGTACGGCTGGAACACTTTTCGGAGGAGTCGAGGCTCAAATCGTCAATGTTGATACTCTGAAGTCTCTCCCTCCTAATCAAATGGGAGAGATTTGGGTTCGAGGACCTAATATGATGCAAGATCTTATTGCACTCTGTTGCAATGTTGACTTGCTCCATTCAGGTTATTTCAACAATCCTCAGGTCACAAGGCAGACCATCGATCGGAACGGCTGGGTACATACCGGAGATCTCGGATATTTTGACGACGATGGCCGTCTTTTTGTTGTCGATCGAATCAAAGAGCTTATCAAGTACAAAGGTTTCCAGATTGCTCCGGCCGAGCTCGAAGGGCTACTAGTGTCTCACCCGGAAATATTAGATTCCGTTGTCATCCCATTCCCGGATGCAGAAGCCGGAGAGGTACCGATTGCATACGTCGTTCGCTCTTCGGACAGCTCACTCACAGAAGAAGACATAATGGAATTCATTGCCAAACAGGTGGCGTCGTTCAAGAGATTACGAAGGGTGACGTTTGTGAAGAGCGTACCGAAGTCGGCCTCCGGGAAAATCTTGAGGAGAGAGCTGATCGAGAAAGTTCGCTCCAAAATTTGA 1674 45.58 MEKSGYGRDGVFRSLRPPLVLPQDPDLSMVSFLFRNSSSYSHKPALIDADGSETLSFSQLKSMVIKVSHGLLHLGIKKNDVVLIFAPNSIQFPICFLGIIAVGAIATTCNPIYTLSELTKQVRDSKPKLVITVAELWDKVMNFNLPTVLLGPEGSFPSISSNLKILTFHDLVQLGRSESHFPAVKIKQTDTAVLLYSSGTTGTSKGVILSHRNFISASQMIVSDQIMAGEMHNIFLNVLPLFHVFGLCCITFSQLQKGNAVVIMSKFEFEKLLSAVEKHKVTDLWIVPPIVLALAKQSVVKKYNLSSLRHIGSGAAPLGKDLMEECAKNIPTAQVIQGYGMTETCGIISVENPDVGIRNTGTAGTLFGGVEAQIVNVDTLKSLPPNQMGEIWVRGPNMMQDLIALCCNVDLLHSGYFNNPQVTRQTIDRNGWVHTGDLGYFDDDGRLFVVDRIKELIKYKGFQIAPAELEGLLVSHPEILDSVVIPFPDAEAGEVPIAYVVRSSDSSLTEEDIMEFIAKQVASFKRLRRVTFVKSVPKSASGKILRRELIEKVRSKI 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 50405268 50407746 + Bma026769.1 Bma07g01477 86614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01477 557 Pfam AMP-binding enzyme 35 459 IPR000873 -
Bma07g01477 557 SUPERFAMILY Acetyl-CoA synthetase-like 22 555 - -
Bma07g01477 557 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Bma07g01477 557 Gene3D - 455 556 IPR045851 -
Bma07g01477 557 Pfam AMP-binding enzyme C-terminal domain 468 543 IPR025110 -
Bma07g01477 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 556 - -
Bma07g01477 557 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 556 - -
Bma07g01477 557 Gene3D - 10 454 IPR042099 -
Bma07g01477 557 CDD 4CL 21 549 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01477 Bma14g00445 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00250 Bma-Chr6:3438898 Bma07g01477 Bma-Chr7:50405268 1.75E-136 dispersed
Bma07g01477 Bma-Chr7:50405268 Bma14g00071 Bma-Chr14:875393 1.25E-143 dispersed
Bma11g00464 Bma-Chr11:5568551 Bma07g01477 Bma-Chr7:50405268 6.31E-24 dispersed
Bma04g01236 Bma-Chr4:36305446 Bma07g01477 Bma-Chr7:50405268 1.16E-36 transposed
Bma04g01625 Bma-Chr4:52195432 Bma07g01477 Bma-Chr7:50405268 0 transposed
Bma05g00204 Bma-Chr5:5710160 Bma07g01477 Bma-Chr7:50405268 1.70E-156 transposed
Bma14g00445 Bma-Chr14:5144008 Bma07g01477 Bma-Chr7:50405268 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01477 K01904 - fve:101299638 844.728