Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01480 ATGGCGGGCGTCGAGGGTTCACCTGGAAGCTCCATGCATGGAGTCACAGGAAGAGAACAGACCTTCGCCTTTTCTGTTGCTTCACCGATGGTGCCTAGCGACCCGACCGCGAAGTTCGATCTTCCGGTTGATTCTGAACACAAGGCGAAGGTTTTCAAGCTCTTTTCCTTCGCTAATCCCCATATGAGAACCTTCCACCTATCGTGGATTTCTTTCTTCACCTGCTTCGTCTCCACCTTCGCCGCCGCTCCCCTCGTCCCTATCATCAGAGACAATCTTGACCTGACGAAACCAGACATCGGAAACGCCGGCGTCGCATCGGTTTCCGGCAGTATTTTCTCGAGGCTTGTGATGGGGGCAGTCTGCGACCTCCTCGGTCCTCGCTATGGTTGTGCCTTTCTCATCATGCTCTCCGCTCCGACCGTCTTCTGCATGTCTTTTGTATCATCGGCGGCCGGGTACATAGCGGTGCGGTTCATGATCGGATTCTCTTTGGCTACTTTCGTCTCCTGCCAGTACTGGATGAGCACCATGTTCAACAGCCAGATCATCGGGCTGGTCAACGGAACGGCGGCGGGATGGGGGAACATGGGAGGAGGAGCGACTCAGCTGTTGATGCCGTTTCTTTATGAGATTATCAAAAGAATGGGTTCTACTCCGTTTACTGCCTGGAGAATCGCCTTCTTCATCCCCGGTTGGATGCATGTGATCATGGGTATCCTGGTTTTAACCCTAGGCCAAGATTTGCCTGATGGAAATCTAAGCACTCTTCAGAAAAAGGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTTCTTTGGTATGCGGTTACGAATTACAGAACTTGGATCTTTGTCCTCCTCTATGGCTACTCCATGGGAGTCGAGCTTTCTACTGATAACGTCATCGCTGAGTATTTCTACGACAGGTTTGACCTAAATCTTCACACTGCCGGAATCATAGCAGCGAGCTTCGGAATGGCTAACCTAGTGGCTCGTCCTTTCGGTGGGTACGCTTCCGACGTCGCGGCTCGTTATTTTGGAATGAGAGGAAGGCTATGGACCCTCTGGATCGTCCAAACCCTAGGTGGAGTTTTCTGCGTTTGGCTGGGAGAGGCCAACTCCCTCCCCATCGCCATCGTCGCCATGATTCTCTTCTCCCTCGGAGCTCAGGCGGCGTGCGGCGCCACTTTTGGCATCATCCCCTTCATCTCTCGCCGCTCCCTGGGAATTATCTCGGGGTTGACCGGGGCAGGAGGGAACTTCGGTTCTGGTCTGACGCAGTTAGTATTCTTCACAAGCGCAAGCTTTTCTACAGAAAAAGGTCTGACTTACATGGGGGCAATGATCATTGCCTGCACTTTGCCAGTTGCTCTGGTTCACTTTCCACAGTGGGGAAGCATGTTCTTGCCGCCGTCAAAGAGCGTAGAGAAAGGTACAGAAGAATTCTATTACGGGTCGGAATGGAATGAGGATGAGAAGAAGAAGGGGCTTCACCAGCAGAGTATCAAGTTCGCTGAAAACAGTCGATCTGAACGAGGAAGACGGGTTGCTTCTGCTCCTACTCCACCAAACACGACACCTGCTCACGTTTAA 1593 52.17 MAGVEGSPGSSMHGVTGREQTFAFSVASPMVPSDPTAKFDLPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLDLTKPDIGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSSAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLLMPFLYEIIKRMGSTPFTAWRIAFFIPGWMHVIMGILVLTLGQDLPDGNLSTLQKKGDVAKDKFSKVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVIAEYFYDRFDLNLHTAGIIAASFGMANLVARPFGGYASDVAARYFGMRGRLWTLWIVQTLGGVFCVWLGEANSLPIAIVAMILFSLGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFTSASFSTEKGLTYMGAMIIACTLPVALVHFPQWGSMFLPPSKSVEKGTEEFYYGSEWNEDEKKKGLHQQSIKFAENSRSERGRRVASAPTPPNTTPAHV 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 50432010 50433759 - Bma026773.1 Bma07g01480 86617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01480 530 Gene3D MFS general substrate transporter like domains 57 254 IPR036259 -
Bma07g01480 530 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Bma07g01480 530 MobiDBLite consensus disorder prediction 491 530 - -
Bma07g01480 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 464 IPR020846 GO:0022857
Bma07g01480 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 527 - -
Bma07g01480 530 Gene3D MFS general substrate transporter like domains 264 465 IPR036259 -
Bma07g01480 530 MobiDBLite consensus disorder prediction 491 513 - -
Bma07g01480 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 527 IPR044772 GO:0015112
Bma07g01480 530 SUPERFAMILY MFS general substrate transporter 58 459 IPR036259 -
Bma07g01480 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01480 Bma11g00186 CCT
Bma07g01480 Bma11g00186 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01480 Bma-Chr7:50432010 Bma07g01481 Bma-Chr7:50439618 0 tandem
Bma15g00175 Bma-Chr15:1857833 Bma07g01480 Bma-Chr7:50432010 0 transposed
Bma11g00186 Bma-Chr11:1680654 Bma07g01480 Bma-Chr7:50432010 1.21E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01480 K02575 - jre:108985433 956.822