Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01553 ATGGAATGTATCTCACAGTTGAATCCGTGTTTGGACCTTTCCGTATCCCTTCGCTGTCGATCTCTCTCTGCTCGATCAGCTCCACAAGTTACGGGAGAGTATCCAACGTTCGGAGTGGTTTCCGTGCGAGGCAGGCGAAGAGACATGGAAGATGCGCTCGATGTTTGTCCATCGTTTTGCCGTAACTGCGGTGACTCGGGGGCTGTGCTGTGTCGAAGCGGCAAACCAGTCCCTCTCTCCTCTGATCACAAGCCGGATCGTCCAGACAAACTGAATCAGATCGAAGCGGCCGGCGGGCAAATCATCTACTGGGGAGGCCCAAGGGTTCTCGGAGTTCTAGCCACATCAAGAACCATTGGTGATAACTATCTGAAGCCCTACGTAAGCTGCTGCAATCCAGAAGGGACAATCCCTGAACTGACCAGACGGCTATGGGACGTTGTGTCCAACGAGACACTGCCTCCCTGTTCTGCTGCGAGCTGGGAAAACAATAGCCCAGAAAATCCCAATAAGGAGTGCATCGATGTGTCGAAGCTGCTGACCAATTTGGCATTAGCTCGAAAAAGTAGCGACAACGTGTGCCTGGTAGTTGTGGACCTCAGGCATGAGACGTTGAGGGCCGTACATTAA 630 52.7 MECISQLNPCLDLSVSLRCRSLSARSAPQVTGEYPTFGVVSVRGRRRDMEDALDVCPSFCRNCGDSGAVLCRSGKPVPLSSDHKPDRPDKLNQIEAAGGQIIYWGGPRVLGVLATSRTIGDNYLKPYVSCCNPEGTIPELTRRLWDVVSNETLPPCSAASWENNSPENPNKECIDVSKLLTNLALARKSSDNVCLVVVDLRHETLRAVH 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 51002858 51004193 + Bma026849.1 Bma07g01553 86690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01553 209 SUPERFAMILY PP2C-like 36 201 IPR036457 -
Bma07g01553 209 PANTHER PROTEIN PHOSPHATASE 2C 37 27 61 - -
Bma07g01553 209 PANTHER ALPHABET, ISOFORM E-RELATED 27 61 - -
Bma07g01553 209 PANTHER ALPHABET, ISOFORM E-RELATED 61 203 - -
Bma07g01553 209 ProSiteProfiles PPM-type phosphatase domain profile. 1 200 IPR001932 -
Bma07g01553 209 SMART PP2C_4 24 198 IPR001932 -
Bma07g01553 209 CDD PP2Cc 62 200 IPR001932 -
Bma07g01553 209 Pfam Protein phosphatase 2C 59 155 IPR001932 -
Bma07g01553 209 Gene3D - 59 206 IPR036457 -
Bma07g01553 209 PANTHER PROTEIN PHOSPHATASE 2C 37 61 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01553 Bma-Chr7:51002858 Bma03g00142 Bma-Chr3:1069355 8.84E-48 dispersed
Bma11g00104 Bma-Chr11:1042831 Bma07g01553 Bma-Chr7:51002858 7.66E-36 wgd
Bma14g00520 Bma-Chr14:5779888 Bma07g01553 Bma-Chr7:51002858 3.89E-13 wgd
Bma07g00086 Bma-Chr7:1652327 Bma07g01553 Bma-Chr7:51002858 1.84E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01553 K14497 - qsu:112022545 182.956