Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01583 GTCTTCCTCATGGCTGCTGAGGTGACCAGCAATTTCTCCAATCCGGAGTTTATTCCGGTTCCATCTCCGCCGAATTTGCAGTCACAAACTGAGCTCTATACTGCACATACGCACGAGGGTCTCCGGTTCTGGCAGCTGATGATTGCCGGTTCCGTCGCCGGTTCCGTCGAGCACATGGCCATGTTCCCCGTGGATACCATCAAGACGCGTATGCAAGCGCTCGGTTCATGCCCCATTAAATCGGTTGGCGTTCGACAAGCTTTTCGCTCAATTTTGAAGTCCGAGGGCCCCGCTGGTTTCTACCGGGGGATTGCTGCAATGGGTCTTGGCGCCGGACCGGCTCACGCTGTCTATTTTTCTGTTTATGAAAACTGCAAGAAGTTCTTCTCTGGTGGGAATCCAAACAATTCTGCCGCCCACGCTGTTTCCGGCATGTGCGCAACGGTGGTCAGCGATGCAGTTCTTACGCCAATGGATATGGTGAAACAGAGACTACAGTTGGGTAACAGTCCGTATAAAGGTGTTTGGGATTGTGTGAAGAGGGTACTGAGAGAGGAGGGATTTGGTGCATTTTATGCTTCTTACAGGACTACTGTGCTCATGAATGCGCCGTATACAGCGGTGCATTTTGCAACCTACGAGGCTGCAAAGAGAGCGTTGATGGAGATATCGCTTGAGAGCGCCAATGATGAAGGGTGGGTTGTCCATGCTACGGCTGGTGCTGGCGCAGGGGCCCTGGCTGCCCTTCTCACGACACCGCTCGACGTAGTCAAAACTCAATTACAATGCCAGGGGGTGTGTGGATGTGATAGATACAGAAGTAGTTCAATTGGGGATGTTTTTCGAACAATCTTGAAGAAAGATGGATATAAAGGGCTCCTCAGAGGATGGACTCCAAGAATGCTTTTTCATGCTCCCGCTGCAGCAATCTGCTGGTCTACATATGAAGCCTCAAAATCCTTCCTCCAAGAACTCAATGGCGGTACAGTCACTTGA 996 51.2 VFLMAAEVTSNFSNPEFIPVPSPPNLQSQTELYTAHTHEGLRFWQLMIAGSVAGSVEHMAMFPVDTIKTRMQALGSCPIKSVGVRQAFRSILKSEGPAGFYRGIAAMGLGAGPAHAVYFSVYENCKKFFSGGNPNNSAAHAVSGMCATVVSDAVLTPMDMVKQRLQLGNSPYKGVWDCVKRVLREEGFGAFYASYRTTVLMNAPYTAVHFATYEAAKRALMEISLESANDEGWVVHATAGAGAGALAALLTTPLDVVKTQLQCQGVCGCDRYRSSSIGDVFRTILKKDGYKGLLRGWTPRMLFHAPAAAICWSTYEASKSFLQELNGGTVT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 51132075 51133247 + Bma026879.1 Bma07g01583 86720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01583 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 128 IPR018108 -
Bma07g01583 331 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 4 327 - -
Bma07g01583 331 SUPERFAMILY Mitochondrial carrier 40 316 IPR023395 -
Bma07g01583 331 Pfam Mitochondrial carrier protein 41 131 IPR018108 -
Bma07g01583 331 Pfam Mitochondrial carrier protein 136 222 IPR018108 -
Bma07g01583 331 Pfam Mitochondrial carrier protein 231 324 IPR018108 -
Bma07g01583 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 135 219 IPR018108 -
Bma07g01583 331 PRINTS Mitochondrial carrier protein signature 46 59 IPR002067 GO:0055085
Bma07g01583 331 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Bma07g01583 331 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Bma07g01583 331 PRINTS Mitochondrial carrier protein signature 150 168 IPR002067 GO:0055085
Bma07g01583 331 PRINTS Mitochondrial carrier protein signature 59 73 IPR002067 GO:0055085
Bma07g01583 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 321 IPR018108 -
Bma07g01583 331 Gene3D Mitochondrial carrier domain 25 169 IPR023395 -
Bma07g01583 331 Gene3D Mitochondrial carrier domain 170 330 IPR023395 -
Bma07g01583 331 PANTHER MITOFERRIN-1-RELATED 4 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01583 Bma-Chr7:51132075 Bma07g01644 Bma-Chr7:52040495 9.79E-08 dispersed
Bma01g01227 Bma-Chr1:15251696 Bma07g01583 Bma-Chr7:51132075 8.27E-17 transposed
Bma04g00118 Bma-Chr4:954175 Bma07g01583 Bma-Chr7:51132075 3.35E-11 transposed
Bma05g00541 Bma-Chr5:29357414 Bma07g01583 Bma-Chr7:51132075 3.34E-24 transposed
Bma06g00281 Bma-Chr6:3948710 Bma07g01583 Bma-Chr7:51132075 2.11E-08 transposed
Bma07g00041 Bma-Chr7:1332196 Bma07g01583 Bma-Chr7:51132075 6.20E-08 transposed
Bma08g00712 Bma-Chr8:42913636 Bma07g01583 Bma-Chr7:51132075 4.80E-17 transposed
Bma14g01043 Bma-Chr14:12450563 Bma07g01583 Bma-Chr7:51132075 6.40E-11 transposed
Bma15g00327 Bma-Chr15:3196727 Bma07g01583 Bma-Chr7:51132075 1.61E-18 transposed
Bma01g01818 Bma-Chr1:64801542 Bma07g01583 Bma-Chr7:51132075 2.78E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01583 K15113 - qsu:112000477 532.717