Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01605 AGAATGGCTTCCATCACCTTCCTATCGGTTATTCTCATCCACATTTGCTTTTTTGTGAGTTTGTGTTTTGCTACGGATCCGTTTGTTAGCTATGATTTTGTGGTCTCTTACATCACTGCCTCTCCTTTGGGAGTTATTGCCGTTAACGGCAAGTTTCCTGGTCCAAGTATTAATGTGACTACTAACTATAATGTAGCAATCAATGTTAAGAACAAGTTGGACGAGAACCTCCTTCTCCATTGGTCCGGAATTCAGCAAAGGCGGAGTTGTTGGCAAGATGGACTTCTTGGTACTAACTGTCCTATTCCTCCAAAGTGGAATTGGACATACCAATTTCAGGTGAAGGATCAAATAGGGAGTTTCTTCTACTTTCCTTCACTGAATTTTCAGAGAGCTTCTGGCGGGTATGGTGGGTTTATTGTAAACAACAGGGCAATCATTCCCATTCCTTTTGCAACCCCGGATGGTGATATCACGATTATGATCGGCGATTGGTATACTCGGAATCACACGGCTTTGAGGAAGACTCTCGACGAAGGGAAAAGCCTTGGGATACCCAATGGTGTTCTTATTAATGGTAAAGGTCCTTATCGCTACAACGACACGCTTGTACCAAAAGGAATTGACCATGAAACGATTGAAGTCCACCCAGGGAAAACTTACCGAATCCGAGTACACAACGTTGGAATATCAACTAGTCTAAATTTCAGGATCCAGAATCATAATCTTCTTCTGGTAGAGACAGAAGGGTCATACACCGTTCAACAGGAATATACGAGCTTGGATATCCACGTAGGACAATCTTATTCGTTTTTGGTAACCATGGATCAGAATGCTAGTACTGATTACTACATTGTAGCTAGTGCTAGGTTTGTGAATGAATCACTTTGGAAAAGAGTTACTGGGGTTGGCATCTTGCGATATTCCAATTCCAAAGGAAAGGCAACCGGGCCTCTCCCTCCTGCACCGAATGATGAGTTTGACAAAACTTTCTCCATGAACCAGGCTAGATCAATCAGATGGAATGTAACAGCTAGCGGTGCACGGCCTAATCCGCAAGGCTCTTTTCGGTACGGATCGATTACTGTGACTGAAATTTACGTGTTGAAGAACATACCAGCAATGGCTATCGATGGGAAAAATCGCACAACTCTGAGTGGGATTTCGTTTGTTAATCCTGCTACACCTATCAGACTAGCCGACCAATTCAAAGTAAAAGGAGTGTACAAGCTTGACTTTCCCATGAAACCCATCGAAGGAGGACCAAAAATGGAAACATTGGTTATTAATGGAACATACAAAGGATTCATGGAGGTTATCTTGCAGAATAATGATACTAAGGTTCAGAGCTACCATATGAGTGGATATGCTTTTTTTGTTGTCGGCATGGACTTTGGGGAATGGTCGGAGAACAGCCGAGGTACGTATAATAAGTGGGATGGAATAGCTCGATCAACTATACAGGTTTATCCGGGTGCATGGACTGCAATTTTGGTCTCTCTTGACAATGTTGGAATCTGGAACCTTAGAACAGAAAACCTCGATTCATGGTACCTCGGACAAGAGACTTATGTCCGTGTCGTTAATCCGGAAGCGACAAATAAAACCGAGTTGCCTTTACCCGACAATGCCCTCTTTTGCGGTGCACTCAGCAAACTACAAAAGTAA 1668 43.05 RMASITFLSVILIHICFFVSLCFATDPFVSYDFVVSYITASPLGVIAVNGKFPGPSINVTTNYNVAINVKNKLDENLLLHWSGIQQRRSCWQDGLLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNFQRASGGYGGFIVNNRAIIPIPFATPDGDITIMIGDWYTRNHTALRKTLDEGKSLGIPNGVLINGKGPYRYNDTLVPKGIDHETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQEYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESLWKRVTGVGILRYSNSKGKATGPLPPAPNDEFDKTFSMNQARSIRWNVTASGARPNPQGSFRYGSITVTEIYVLKNIPAMAIDGKNRTTLSGISFVNPATPIRLADQFKVKGVYKLDFPMKPIEGGPKMETLVINGTYKGFMEVILQNNDTKVQSYHMSGYAFFVVGMDFGEWSENSRGTYNKWDGIARSTIQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTELPLPDNALFCGALSKLQK 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 51465522 51468708 + Bma026901.1 Bma07g01605 86742

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01605 555 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 13 551 - -
Bma07g01605 555 Gene3D - 23 143 IPR008972 -
Bma07g01605 555 SUPERFAMILY Cupredoxins 375 548 IPR008972 -
Bma07g01605 555 SUPERFAMILY Cupredoxins 23 170 IPR008972 -
Bma07g01605 555 PANTHER MULTI-COPPER OXIDASE 13 551 IPR045087 -
Bma07g01605 555 Pfam Multicopper oxidase 157 310 IPR001117 -
Bma07g01605 555 Pfam Multicopper oxidase 45 144 IPR011707 GO:0005507
Bma07g01605 555 Pfam Multicopper oxidase 398 530 IPR011706 GO:0005507|GO:0016491
Bma07g01605 555 Gene3D - 155 348 IPR008972 -
Bma07g01605 555 Gene3D - 361 554 IPR008972 -
Bma07g01605 555 SUPERFAMILY Cupredoxins 151 350 IPR008972 -
Bma07g01605 555 CDD CuRO_1_AAO_like_1 29 142 IPR034273 GO:0005507
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01605 - - - qsu:112020344 1016.53
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01605 Bma-Chr7:51465522 Bma12g01160 Bma-Chr12:44143657 0 dispersed
Bma03g00364 Bma-Chr3:2705001 Bma07g01605 Bma-Chr7:51465522 3.97E-133 transposed
Bma14g00035 Bma-Chr14:480754 Bma07g01605 Bma-Chr7:51465522 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g496 . . . . . . Bma07g01605 . . . . Cma15g01148 . Car15g01043 . . . . . . . . . . . . . . . . . . . . . . Csa05g00396 Chy09g01117 . . Blo19g00222 . Bda09g00089 Bpe08g01440 . . . . . Cmo15g01208 . . . . . Cpe13g00220 . . . . . . . Cla01g00369 Cam01g0389 Cec01g0382 Cco01g0400 Clacu01g0388 Cmu01g0369 Cre09g2141 Lsi09g00399 . . Cme09g01647
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000359 4 3 4 4 4 4 5 4 4 4 5 4 5 4 4 5 4 6 5 4 4 4 4 4 4 5 4 8 5 2 130