Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01609 ATGAAGCTTGAGCTTAAGAAAGTGGTTTATTTATTGAGTGTTACACTAATTGTGCTCTTTCCTGCACTAAGTTTCTCTCAAGACACCTTTATCCCTTCTAGAGCCTCCTTCTTTGGTAGCCCTGATTGCTATGGAACTCCAACGGGAGCTTGTGGCTTTGGTGAGTTCGGAAGAACTGTGAACGATGGGAATGTGGGAGCAGTTTCAAGGCTTTATAGAAACGGTTCTGGCTGCGGTGCATGCTATCAGGTCAGGTGCAAGGTACCAAAATGCTGCAGTAATGACGGGGTGACGGTGGTGGTGACCGACTACGGCGAGGGAGATCGCACCGATTTCATTTTCAGCCCCAGAGCTTTCACCAAATTGGCCAATCCAAACGCTGCCACGGAGCTGTTCTCATACGGCGTGGTGGACGTAGAATACAGAAGAGTTCCCTGCCAATACAGCGGATACAACGTGAAATTCAAGGTCCAACCACACAGCAACTTTCCAGACTACTTGGCCATTGTGATCATATATGTCTCTGGCCAGAATGATATCACAGCCGTCGAATTGTGGCAGGAGGATTGCAAGGAATGGAGGGGAATGAGGAGGGCATATGGAGGAGTGTGGGACATGGCTAACCCACCCAGAGGAGACGTCAATTTGAGGTTCCAAGTTTATGGGAATGGAGGGTTGCAGTGGGTTCAAGCTTTCAATGTTATTCCAAGCAATTGGAAGGCAGGCTACGTTTATGACACCAATATTCTACTAAATTAA 759 47.69 MKLELKKVVYLLSVTLIVLFPALSFSQDTFIPSRASFFGSPDCYGTPTGACGFGEFGRTVNDGNVGAVSRLYRNGSGCGACYQVRCKVPKCCSNDGVTVVVTDYGEGDRTDFIFSPRAFTKLANPNAATELFSYGVVDVEYRRVPCQYSGYNVKFKVQPHSNFPDYLAIVIIYVSGQNDITAVELWQEDCKEWRGMRRAYGGVWDMANPPRGDVNLRFQVYGNGGLQWVQAFNVIPSNWKAGYVYDTNILLN 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 51522882 51524010 + Bma026905.1 Bma07g01609 86746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01609 252 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Bma07g01609 252 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Bma07g01609 252 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Bma07g01609 252 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Bma07g01609 252 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Bma07g01609 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 151 IPR007112 -
Bma07g01609 252 Gene3D - 147 248 IPR036749 -
Bma07g01609 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 247 IPR007117 -
Bma07g01609 252 SUPERFAMILY PHL pollen allergen 152 246 IPR036749 -
Bma07g01609 252 SUPERFAMILY Barwin-like endoglucanases 16 150 IPR036908 -
Bma07g01609 252 PANTHER EXPANSIN-B3 11 251 - -
Bma07g01609 252 PANTHER EXPANSIN-LIKE B1 11 251 - -
Bma07g01609 252 SMART dpbb_1 65 141 IPR007112 -
Bma07g01609 252 Gene3D - 21 146 IPR036908 -
Bma07g01609 252 Pfam Expansin C-terminal domain 153 236 IPR007117 -
Bma07g01609 252 Pfam Lytic transglycolase 69 141 IPR009009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01609 Bma-Chr7:51522882 Bma14g00644 Bma-Chr14:6941482 8.45E-70 dispersed
Bma07g01609 Bma-Chr7:51522882 Bma03g00630 Bma-Chr3:5187959 4.77E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01609 - - qsu:111989701 366.696