Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01624 ATGAGCCAACCTAAAGTAAAGTGTAGGGTAGGTAAATATGAGGTTGGAAGAACGATTGGCGAGGGGACATTCGCGAAAGTCAAATTTGCGAAGAATTCTGAGACAGAAGAATCTGTTGCCCTTAAAATACTTGATAAAGAGAAGGTTCTCAAGCACAAGATGGCCGAACAGATCAAGCGGGAGGTAGCAACAATGAAGTTGATAAAGCATCCGAATGTCGTGCGGTTGTTTGAGGTAATGGGAAGCAGAACAAAAATCTTCATTGTTTTGGAGTTTGCCACTGGTGGGGAACTATTTGACAAAATTGTAAGCCATGGGCGTATGAGAGAAGATGAAGCAAGGCGATATTTTCAGCAGCTTATAAATGCTGTCGATTATTGTCACAGTAGGGGTGTCTACCATCGAGATCTTAAGATAAATTCTTATTCGATAATCTGTATGATTTTAATTTTTCTTGTTCCCCAGCCAGAAAATCTGCTATTAGATGCTCATGGAAACCTTAAAGTTTCCGATTTTGGATTGAGTGCACTTTCTCAACAATGTCAAACCAACAAAAATCATTTATTCATTGATCATGAATTGCAGGACGATGGCTTGCTTCACACTACTTGTGGAACTCCAAATTATGTTGCTCCCGAGAAATTAGACCGTGACATGTTTTATTTTTTAAAAATTATCTCAAATACTGTTTTTTTTACAAAAATATTGGAGATATATACAATTTACCGGCTCGGTAATATTTCTTCTGCTGAATTTACTTGTCCTCCATGGCTATCTTTCGAAGCCATGAAATTGATAGCTCGGATTTTGGATCCTAATCCTATGACGAGAATCTCGATATCTGAAATTTTAAGCGACGAATGGTTTAAGAAAGACTATAGTCCGCCTGTATTTGAAGAGAAACAGGATGCGAATTTAGACGATGTGGAAGCCGTTTTCAAAGATGCAGAGGAACACCACGTGACAGAGAAGAAGGAAGAGCAGCCAGTTGCAATGAACGCCTTCGATCTAATATCCATGTCGAAAGGACTCAATCTCGGAAATTTGTTCGATGTAGAACAGCAGGAATTTAAGAGAGAAACTAGGTTTACATCTAAATGCCCTGGAAATGACATTATAAACAAGATACAAGATGCGGTGAAACCTCTCGGTTTTGATGTACAAAAGAAGAACTACAAGATGCGGCTCGAAAATTCAAAAGCGGGACGGAAGGGAAACCTTAATATTGTGACAGAGATTTTTCAAGTGGCGCCCTCTCTTCACTTCTATAAAAACCTCTCGACTTCGTTGGACGACGTGGTGTGGATGACGGAGGAAGACATGGAAAAAACTAAGTAA 1338 39.31 MSQPKVKCRVGKYEVGRTIGEGTFAKVKFAKNSETEESVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVRLFEVMGSRTKIFIVLEFATGGELFDKIVSHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKINSYSIICMILIFLVPQPENLLLDAHGNLKVSDFGLSALSQQCQTNKNHLFIDHELQDDGLLHTTCGTPNYVAPEKLDRDMFYFLKIISNTVFFTKILEIYTIYRLGNISSAEFTCPPWLSFEAMKLIARILDPNPMTRISISEILSDEWFKKDYSPPVFEEKQDANLDDVEAVFKDAEEHHVTEKKEEQPVAMNAFDLISMSKGLNLGNLFDVEQQEFKRETRFTSKCPGNDIINKIQDAVKPLGFDVQKKNYKMRLENSKAGRKGNLNIVTEIFQVAPSLHFYKNLSTSLDDVVWMTEEDMEKTK 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 51836407 51841033 - Bma026921.1 Bma07g01624 86761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01624 445 CDD CIPK_C 333 421 - -
Bma07g01624 445 Pfam Protein kinase domain 156 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01624 445 Pfam Protein kinase domain 13 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01624 445 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Bma07g01624 445 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Bma07g01624 445 ProSiteProfiles Protein kinase domain profile. 13 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01624 445 Gene3D Kinase associated domain 1, KA1 326 436 - -
Bma07g01624 445 ProSiteProfiles NAF domain profile. 327 351 IPR018451 GO:0007165
Bma07g01624 445 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 2 437 - -
Bma07g01624 445 Pfam NAF domain 329 389 IPR004041 GO:0007165
Bma07g01624 445 Gene3D Transferase(Phosphotransferase) domain 1 93 317 - -
Bma07g01624 445 PANTHER - 2 437 - -
Bma07g01624 445 SUPERFAMILY Protein kinase-like (PK-like) 10 308 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01624 Bma-Chr7:51836407 Bma14g00807 Bma-Chr14:9006692 0 dispersed
Bma07g01624 Bma-Chr7:51836407 Bma07g01205 Bma-Chr7:46835175 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66640 PF00069 Pkinase 8.50E-13 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01624 - - zju:107410429 648.662