Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g01648 | ATGGCTGCCAAGTTTCTGCAACTGAGCTGCACAGCATGCAGCAGGAGAGACGACATGTCACCACAGAGGCCAAGAGAAAGAGAAGAGAATGTGGAGAGTTCTGAGAGAAAGGGGAAGGCGAAGGCCGTGTTTGGCATAAGTGGAATGACATGCTCACCATGTGCAGGCTCCATCGAAAGGTCAATCAATCGTCTTCCCGGAATTCTCGATGCATCGGTCGATTTCTTGAACGATAGAGCTCAGATCCATTACAACCCCGGCTTTGTTAATGAGGAGAGCATTCGTGGGGCTATTGAGGATGTTGGGTTCGAAGCAAGATTGTTATATGAACAAGACATCAGTAAAACCACCCAGAAATGTCAAATACGGATTGAAGGAATGACCTGCACTGCCTGTTCGACAGCAGTTGAGCAAAACTTACAAGCTATCAATGGCGTCGAAAGAGCAGCAGTTGCATTAGCAATAGAGGAAGCTGAAATTCACTACAACCCAGATATCATAAAGCCTGAAACTCTTCTTCAGTCTATTCAAGATTCTGGATTTGCACCCACACTCCTCGCCATTGGAGATCGATCGAGCAAAATAGAACTTCAAATTGAAGGCTTGAGAACAGGTGCTTCAATGGCGATAATTGAAAATTCTCTCAAATCAGTTGTTGGAATAGAAGACACAGTTGCCGACCATACGCTCGGGAAAATCTCCATTTCTTACAGACCAGACATGGTGGGACCGAGGACATTCATTGAGGTCATTGAATCGATCAAATCTGGAGCTTTCAAAGCAACCATTTTTCCTCAAGAAAGAAGAGATTCTTACAGGGAGAAAGAAATCAAACAGTATTTTCGATCTTTCTTATGGAGCTTTGCTTTTGCAATTCCAGTTTTTCTAACTTCCATGGTGTTCATGTACATTCCCACAATCGAACGAGCACTGGATACTAAAGTATGGAATATGATGAACATAGGAATGATTGTGAGGTGGGAGCTAACAACGCCAGTGCAGTTCTTCATCGGCCGGAGATTCTACGTCGGAGCCTATAAATCTCTCCGACATGGGTCGGCTAATATGGATGTTTTAGTTGCATTAGGAACAAATGCAGCCTATTTTTACTCAGTCTATATCATAATAAGATCTGTTTCTTCCCCACATTTTGAGGGCACAGATTTTTTTGAAACCAGCATAATGCTGATTTCATTTATTCTTCTGGGGAAATACTTGGAGGTTTTGGCGAAAGGGAAGACGTCGGAAGCGATAGCCAAGCTTATGAACTTGACTCCAGAAACAGCGACTTTGTTGAGTCTGGATGAGGGTGGAAACGTGGTGGGTGAGAGAGAGATTGATAGCCGTCTGATTCAGAAGAATGATGTGATTAAGGTGGTTGCAGGTGAGAAAGTGGGGTCAGATGGGTACGTTGTATGGGGAGAGAGCCGTGTGAACGAGAGTATGATAACAGGAGAAGCAAAGCCAGTGGGGAAGAAGAAAGGCGATGCAGTGATTGGAGGAACAGTGAATGAAAATGGAGTTCTTCATGTTAGGGCAACGAGAGTTGGATCAGATAGTGCACTTTCTCAGATTGTTAGACTCGTTGAATCGGCCCAGATGGCTAAAGCTCCTGTTCAGAAATTTGCTGATACAATTTCCAAGTTCTTTGTGCCTATTGTTAGTAATCTGTCTGTCTGTCTCTCTCTCTCTCTCTCCCTCCTCAATGAAGTTTCTTTGTTTGTGCAGGTGATTGTGCTTTCACTTTTGACATGGGTAACCTGGTATTTAACTGGAAAGTTCAATCTGTATCCAAAATCATGGATACCAGCTTCAATGGATAGCTTTGAGCTTGCTCTTCAGTTTGGAATATCAGTGATGGTCATAGCCTGCCCCTGTGCATTAGGCCTTGCAACTCCTACAGCCGTCATGGTCGGCACGGGTGTCGGTGCCACTCAAGGAGTGCTCATCAAAGGAGGTCTGGCCTTAGAATCCACCCACAAGGTGAACTGCATAGTGTTCGACAAGACTGGAACTCTAACAGTAGGGAAGCCAATGGTTGTCAGAGAAAAGCTGTTTAAAGATATGAAACTTGATCATCTACTTATCCTCGTTGGTGCAACTGAGGTGAACAGTGAGCACCCTGTAGGCAAAGCCATTGTTGATTATGCAAAGAATTGTAGAGATGGGGAAGAATATAGTCCTTCCTGGCCAGAAGCAAAGAACTTCATCACCATTGCTGGCCATGGAGTTAAAGCCACAGTAAAAAACAAGGAAGTCATTGTGGGTAACAGGAGCTTGATGATCGACCACAACATAGTCATTCCAATTGAAGCTCAAAATTTTCTAGCTGAAGCAGAAAGTATGGCTCAAACTGGAATCATCGTAGCCATTGATGGGGAGGTCGAGGGAGCTTTCGCCATTTCTGACACGCTAAAACCAGGCGCAAAAGAAGTTATTTCTATTCTAAACTCCATGAAAGTGAAAAGCATAATGGTGACTGGAGATAACTGGGGTACTGCGAAGTCCATCGCCATGGAAGTCGGAATCGAAACAGTCATCGCCGAGGCTAAACCTGAGCAGAAAGCTGAGAAAATTAAGGAGCTGCAGGCAGCAGGCCACAAAGTAGCAATGGTGGGAGATGGAATAAACGACTCTCCAGCTCTAGCAGCGGCTGACGTCGGTATAGCGATAGGAGCCGGAACCGACGTAGCCATTGAAGCTGCTGACATTGTTCTGATAAAAAGCAACTTAGAAGATGTAATAACAGCCATCGATCTTTCCAGAAAAACCTTCTCTCGAATTCGTTTGAACTACATTTGGGCTCTAGTTTATAACCTCCTCGGCATTCCAATAGCAGCCGGATGCCTGTTTCCGGCGACCAGATTCAGACTACCGCCGTGGGTTGCCGGAGCTGCCATGGCTGCTTCTTCTGTCAGCGTCGTTTGTAGCTCTCTCGTTTTGAAATTTTACAAGAGACCTAAGAAGCTGGAGATGAACAGTCTTCAGATGAATGGAATCACCATTGAATGA | 3012 | 44.79 | MAAKFLQLSCTACSRRDDMSPQRPREREENVESSERKGKAKAVFGISGMTCSPCAGSIERSINRLPGILDASVDFLNDRAQIHYNPGFVNEESIRGAIEDVGFEARLLYEQDISKTTQKCQIRIEGMTCTACSTAVEQNLQAINGVERAAVALAIEEAEIHYNPDIIKPETLLQSIQDSGFAPTLLAIGDRSSKIELQIEGLRTGASMAIIENSLKSVVGIEDTVADHTLGKISISYRPDMVGPRTFIEVIESIKSGAFKATIFPQERRDSYREKEIKQYFRSFLWSFAFAIPVFLTSMVFMYIPTIERALDTKVWNMMNIGMIVRWELTTPVQFFIGRRFYVGAYKSLRHGSANMDVLVALGTNAAYFYSVYIIIRSVSSPHFEGTDFFETSIMLISFILLGKYLEVLAKGKTSEAIAKLMNLTPETATLLSLDEGGNVVGEREIDSRLIQKNDVIKVVAGEKVGSDGYVVWGESRVNESMITGEAKPVGKKKGDAVIGGTVNENGVLHVRATRVGSDSALSQIVRLVESAQMAKAPVQKFADTISKFFVPIVSNLSVCLSLSLSLLNEVSLFVQVIVLSLLTWVTWYLTGKFNLYPKSWIPASMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGLALESTHKVNCIVFDKTGTLTVGKPMVVREKLFKDMKLDHLLILVGATEVNSEHPVGKAIVDYAKNCRDGEEYSPSWPEAKNFITIAGHGVKATVKNKEVIVGNRSLMIDHNIVIPIEAQNFLAEAESMAQTGIIVAIDGEVEGAFAISDTLKPGAKEVISILNSMKVKSIMVTGDNWGTAKSIAMEVGIETVIAEAKPEQKAEKIKELQAAGHKVAMVGDGINDSPALAAADVGIAIGAGTDVAIEAADIVLIKSNLEDVITAIDLSRKTFSRIRLNYIWALVYNLLGIPIAAGCLFPATRFRLPPWVAGAAMAASSVSVVCSSLVLKFYKRPKKLEMNSLQMNGITIE | 1003 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 52074438 | 52080135 | - | Bma026946.1 | Bma07g01648 | 86785 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g01648 | 1003 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 21 | 560 | - | - | |
Bma07g01648 | 1003 | SFLD | p-type atpase | 648 | 924 | IPR044492 | - | |
Bma07g01648 | 1003 | SUPERFAMILY | HMA, heavy metal-associated domain | 39 | 108 | IPR036163 | GO:0046872 | |
Bma07g01648 | 1003 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 387 | 940 | IPR023298 | - | |
Bma07g01648 | 1003 | MobiDBLite | consensus disorder prediction | 15 | 36 | - | - | |
Bma07g01648 | 1003 | PANTHER | ATP7, ISOFORM B | 21 | 560 | - | - | |
Bma07g01648 | 1003 | ProSitePatterns | Heavy-metal-associated domain. | 124 | 153 | IPR017969 | GO:0046872 | |
Bma07g01648 | 1003 | Pfam | haloacid dehalogenase-like hydrolase | 662 | 886 | - | - | |
Bma07g01648 | 1003 | CDD | HMA | 121 | 184 | IPR006121 | GO:0046872 | |
Bma07g01648 | 1003 | SFLD | C1.7: P-type atpase like | 648 | 924 | - | - | |
Bma07g01648 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 819 | 829 | - | - | |
Bma07g01648 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 666 | 680 | - | - | |
Bma07g01648 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 872 | 891 | - | - | |
Bma07g01648 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 479 | 493 | - | - | |
Bma07g01648 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 895 | 907 | - | - | |
Bma07g01648 | 1003 | SUPERFAMILY | HAD-like | 665 | 978 | IPR036412 | - | |
Bma07g01648 | 1003 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 668 | 674 | IPR018303 | - | |
Bma07g01648 | 1003 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 356 | 981 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bma07g01648 | 1003 | Gene3D | - | 194 | 263 | - | - | |
Bma07g01648 | 1003 | Gene3D | - | 753 | 803 | IPR023299 | GO:0000166 | |
Bma07g01648 | 1003 | Gene3D | - | 673 | 752 | IPR023299 | GO:0000166 | |
Bma07g01648 | 1003 | SUPERFAMILY | Calcium ATPase, transduction domain A | 443 | 529 | IPR008250 | - | |
Bma07g01648 | 1003 | ProSiteProfiles | Heavy-metal-associated domain profile. | 41 | 107 | IPR006121 | GO:0046872 | |
Bma07g01648 | 1003 | Gene3D | - | 633 | 929 | IPR023214 | - | |
Bma07g01648 | 1003 | Gene3D | - | 411 | 533 | - | - | |
Bma07g01648 | 1003 | ProSiteProfiles | Heavy-metal-associated domain profile. | 194 | 263 | IPR006121 | GO:0046872 | |
Bma07g01648 | 1003 | ProSiteProfiles | Heavy-metal-associated domain profile. | 119 | 185 | IPR006121 | GO:0046872 | |
Bma07g01648 | 1003 | SUPERFAMILY | HMA, heavy metal-associated domain | 189 | 258 | IPR036163 | GO:0046872 | |
Bma07g01648 | 1003 | MobiDBLite | consensus disorder prediction | 18 | 36 | - | - | |
Bma07g01648 | 1003 | Gene3D | - | 35 | 107 | - | - | |
Bma07g01648 | 1003 | CDD | P-type_ATPase_Cu-like | 282 | 968 | - | - | |
Bma07g01648 | 1003 | Pfam | E1-E2 ATPase | 424 | 644 | - | - | |
Bma07g01648 | 1003 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 601 | 952 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma07g01648 | 1003 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 574 | 992 | - | - | |
Bma07g01648 | 1003 | Gene3D | - | 115 | 187 | - | - | |
Bma07g01648 | 1003 | Pfam | Heavy-metal-associated domain | 122 | 181 | IPR006121 | GO:0046872 | |
Bma07g01648 | 1003 | Pfam | Heavy-metal-associated domain | 44 | 104 | IPR006121 | GO:0046872 | |
Bma07g01648 | 1003 | CDD | HMA | 46 | 106 | IPR006121 | GO:0046872 | |
Bma07g01648 | 1003 | SUPERFAMILY | HMA, heavy metal-associated domain | 116 | 186 | IPR036163 | GO:0046872 | |
Bma07g01648 | 1003 | PRINTS | Copper-transporting ATPase 1 signature | 96 | 116 | - | - | |
Bma07g01648 | 1003 | PRINTS | Copper-transporting ATPase 1 signature | 67 | 90 | - | - | |
Bma07g01648 | 1003 | PRINTS | Copper-transporting ATPase 1 signature | 142 | 163 | - | - | |
Bma07g01648 | 1003 | PRINTS | Copper-transporting ATPase 1 signature | 41 | 66 | - | - | |
Bma07g01648 | 1003 | PANTHER | ATP7, ISOFORM B | 574 | 992 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00880 | Bma-Chr7:30132494 | Bma07g01648 | Bma-Chr7:52074438 | 0 | dispersed | |
Bma07g01648 | Bma-Chr7:52074438 | Bma11g00286 | Bma-Chr11:2630417 | 3.77E-15 | dispersed | |
Bma07g01648 | Bma-Chr7:52074438 | Bma01g02192 | Bma-Chr1:78803560 | 2.03E-57 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g01648 | K17686 | - | cit:102615719 | 1315.44 |