Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01648 ATGGCTGCCAAGTTTCTGCAACTGAGCTGCACAGCATGCAGCAGGAGAGACGACATGTCACCACAGAGGCCAAGAGAAAGAGAAGAGAATGTGGAGAGTTCTGAGAGAAAGGGGAAGGCGAAGGCCGTGTTTGGCATAAGTGGAATGACATGCTCACCATGTGCAGGCTCCATCGAAAGGTCAATCAATCGTCTTCCCGGAATTCTCGATGCATCGGTCGATTTCTTGAACGATAGAGCTCAGATCCATTACAACCCCGGCTTTGTTAATGAGGAGAGCATTCGTGGGGCTATTGAGGATGTTGGGTTCGAAGCAAGATTGTTATATGAACAAGACATCAGTAAAACCACCCAGAAATGTCAAATACGGATTGAAGGAATGACCTGCACTGCCTGTTCGACAGCAGTTGAGCAAAACTTACAAGCTATCAATGGCGTCGAAAGAGCAGCAGTTGCATTAGCAATAGAGGAAGCTGAAATTCACTACAACCCAGATATCATAAAGCCTGAAACTCTTCTTCAGTCTATTCAAGATTCTGGATTTGCACCCACACTCCTCGCCATTGGAGATCGATCGAGCAAAATAGAACTTCAAATTGAAGGCTTGAGAACAGGTGCTTCAATGGCGATAATTGAAAATTCTCTCAAATCAGTTGTTGGAATAGAAGACACAGTTGCCGACCATACGCTCGGGAAAATCTCCATTTCTTACAGACCAGACATGGTGGGACCGAGGACATTCATTGAGGTCATTGAATCGATCAAATCTGGAGCTTTCAAAGCAACCATTTTTCCTCAAGAAAGAAGAGATTCTTACAGGGAGAAAGAAATCAAACAGTATTTTCGATCTTTCTTATGGAGCTTTGCTTTTGCAATTCCAGTTTTTCTAACTTCCATGGTGTTCATGTACATTCCCACAATCGAACGAGCACTGGATACTAAAGTATGGAATATGATGAACATAGGAATGATTGTGAGGTGGGAGCTAACAACGCCAGTGCAGTTCTTCATCGGCCGGAGATTCTACGTCGGAGCCTATAAATCTCTCCGACATGGGTCGGCTAATATGGATGTTTTAGTTGCATTAGGAACAAATGCAGCCTATTTTTACTCAGTCTATATCATAATAAGATCTGTTTCTTCCCCACATTTTGAGGGCACAGATTTTTTTGAAACCAGCATAATGCTGATTTCATTTATTCTTCTGGGGAAATACTTGGAGGTTTTGGCGAAAGGGAAGACGTCGGAAGCGATAGCCAAGCTTATGAACTTGACTCCAGAAACAGCGACTTTGTTGAGTCTGGATGAGGGTGGAAACGTGGTGGGTGAGAGAGAGATTGATAGCCGTCTGATTCAGAAGAATGATGTGATTAAGGTGGTTGCAGGTGAGAAAGTGGGGTCAGATGGGTACGTTGTATGGGGAGAGAGCCGTGTGAACGAGAGTATGATAACAGGAGAAGCAAAGCCAGTGGGGAAGAAGAAAGGCGATGCAGTGATTGGAGGAACAGTGAATGAAAATGGAGTTCTTCATGTTAGGGCAACGAGAGTTGGATCAGATAGTGCACTTTCTCAGATTGTTAGACTCGTTGAATCGGCCCAGATGGCTAAAGCTCCTGTTCAGAAATTTGCTGATACAATTTCCAAGTTCTTTGTGCCTATTGTTAGTAATCTGTCTGTCTGTCTCTCTCTCTCTCTCTCCCTCCTCAATGAAGTTTCTTTGTTTGTGCAGGTGATTGTGCTTTCACTTTTGACATGGGTAACCTGGTATTTAACTGGAAAGTTCAATCTGTATCCAAAATCATGGATACCAGCTTCAATGGATAGCTTTGAGCTTGCTCTTCAGTTTGGAATATCAGTGATGGTCATAGCCTGCCCCTGTGCATTAGGCCTTGCAACTCCTACAGCCGTCATGGTCGGCACGGGTGTCGGTGCCACTCAAGGAGTGCTCATCAAAGGAGGTCTGGCCTTAGAATCCACCCACAAGGTGAACTGCATAGTGTTCGACAAGACTGGAACTCTAACAGTAGGGAAGCCAATGGTTGTCAGAGAAAAGCTGTTTAAAGATATGAAACTTGATCATCTACTTATCCTCGTTGGTGCAACTGAGGTGAACAGTGAGCACCCTGTAGGCAAAGCCATTGTTGATTATGCAAAGAATTGTAGAGATGGGGAAGAATATAGTCCTTCCTGGCCAGAAGCAAAGAACTTCATCACCATTGCTGGCCATGGAGTTAAAGCCACAGTAAAAAACAAGGAAGTCATTGTGGGTAACAGGAGCTTGATGATCGACCACAACATAGTCATTCCAATTGAAGCTCAAAATTTTCTAGCTGAAGCAGAAAGTATGGCTCAAACTGGAATCATCGTAGCCATTGATGGGGAGGTCGAGGGAGCTTTCGCCATTTCTGACACGCTAAAACCAGGCGCAAAAGAAGTTATTTCTATTCTAAACTCCATGAAAGTGAAAAGCATAATGGTGACTGGAGATAACTGGGGTACTGCGAAGTCCATCGCCATGGAAGTCGGAATCGAAACAGTCATCGCCGAGGCTAAACCTGAGCAGAAAGCTGAGAAAATTAAGGAGCTGCAGGCAGCAGGCCACAAAGTAGCAATGGTGGGAGATGGAATAAACGACTCTCCAGCTCTAGCAGCGGCTGACGTCGGTATAGCGATAGGAGCCGGAACCGACGTAGCCATTGAAGCTGCTGACATTGTTCTGATAAAAAGCAACTTAGAAGATGTAATAACAGCCATCGATCTTTCCAGAAAAACCTTCTCTCGAATTCGTTTGAACTACATTTGGGCTCTAGTTTATAACCTCCTCGGCATTCCAATAGCAGCCGGATGCCTGTTTCCGGCGACCAGATTCAGACTACCGCCGTGGGTTGCCGGAGCTGCCATGGCTGCTTCTTCTGTCAGCGTCGTTTGTAGCTCTCTCGTTTTGAAATTTTACAAGAGACCTAAGAAGCTGGAGATGAACAGTCTTCAGATGAATGGAATCACCATTGAATGA 3012 44.79 MAAKFLQLSCTACSRRDDMSPQRPREREENVESSERKGKAKAVFGISGMTCSPCAGSIERSINRLPGILDASVDFLNDRAQIHYNPGFVNEESIRGAIEDVGFEARLLYEQDISKTTQKCQIRIEGMTCTACSTAVEQNLQAINGVERAAVALAIEEAEIHYNPDIIKPETLLQSIQDSGFAPTLLAIGDRSSKIELQIEGLRTGASMAIIENSLKSVVGIEDTVADHTLGKISISYRPDMVGPRTFIEVIESIKSGAFKATIFPQERRDSYREKEIKQYFRSFLWSFAFAIPVFLTSMVFMYIPTIERALDTKVWNMMNIGMIVRWELTTPVQFFIGRRFYVGAYKSLRHGSANMDVLVALGTNAAYFYSVYIIIRSVSSPHFEGTDFFETSIMLISFILLGKYLEVLAKGKTSEAIAKLMNLTPETATLLSLDEGGNVVGEREIDSRLIQKNDVIKVVAGEKVGSDGYVVWGESRVNESMITGEAKPVGKKKGDAVIGGTVNENGVLHVRATRVGSDSALSQIVRLVESAQMAKAPVQKFADTISKFFVPIVSNLSVCLSLSLSLLNEVSLFVQVIVLSLLTWVTWYLTGKFNLYPKSWIPASMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGLALESTHKVNCIVFDKTGTLTVGKPMVVREKLFKDMKLDHLLILVGATEVNSEHPVGKAIVDYAKNCRDGEEYSPSWPEAKNFITIAGHGVKATVKNKEVIVGNRSLMIDHNIVIPIEAQNFLAEAESMAQTGIIVAIDGEVEGAFAISDTLKPGAKEVISILNSMKVKSIMVTGDNWGTAKSIAMEVGIETVIAEAKPEQKAEKIKELQAAGHKVAMVGDGINDSPALAAADVGIAIGAGTDVAIEAADIVLIKSNLEDVITAIDLSRKTFSRIRLNYIWALVYNLLGIPIAAGCLFPATRFRLPPWVAGAAMAASSVSVVCSSLVLKFYKRPKKLEMNSLQMNGITIE 1003
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 52074438 52080135 - Bma026946.1 Bma07g01648 86785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01648 1003 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 21 560 - -
Bma07g01648 1003 SFLD p-type atpase 648 924 IPR044492 -
Bma07g01648 1003 SUPERFAMILY HMA, heavy metal-associated domain 39 108 IPR036163 GO:0046872
Bma07g01648 1003 SUPERFAMILY Calcium ATPase, transmembrane domain M 387 940 IPR023298 -
Bma07g01648 1003 MobiDBLite consensus disorder prediction 15 36 - -
Bma07g01648 1003 PANTHER ATP7, ISOFORM B 21 560 - -
Bma07g01648 1003 ProSitePatterns Heavy-metal-associated domain. 124 153 IPR017969 GO:0046872
Bma07g01648 1003 Pfam haloacid dehalogenase-like hydrolase 662 886 - -
Bma07g01648 1003 CDD HMA 121 184 IPR006121 GO:0046872
Bma07g01648 1003 SFLD C1.7: P-type atpase like 648 924 - -
Bma07g01648 1003 PRINTS P-type cation-transporting ATPase superfamily signature 819 829 - -
Bma07g01648 1003 PRINTS P-type cation-transporting ATPase superfamily signature 666 680 - -
Bma07g01648 1003 PRINTS P-type cation-transporting ATPase superfamily signature 872 891 - -
Bma07g01648 1003 PRINTS P-type cation-transporting ATPase superfamily signature 479 493 - -
Bma07g01648 1003 PRINTS P-type cation-transporting ATPase superfamily signature 895 907 - -
Bma07g01648 1003 SUPERFAMILY HAD-like 665 978 IPR036412 -
Bma07g01648 1003 ProSitePatterns E1-E2 ATPases phosphorylation site. 668 674 IPR018303 -
Bma07g01648 1003 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 356 981 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bma07g01648 1003 Gene3D - 194 263 - -
Bma07g01648 1003 Gene3D - 753 803 IPR023299 GO:0000166
Bma07g01648 1003 Gene3D - 673 752 IPR023299 GO:0000166
Bma07g01648 1003 SUPERFAMILY Calcium ATPase, transduction domain A 443 529 IPR008250 -
Bma07g01648 1003 ProSiteProfiles Heavy-metal-associated domain profile. 41 107 IPR006121 GO:0046872
Bma07g01648 1003 Gene3D - 633 929 IPR023214 -
Bma07g01648 1003 Gene3D - 411 533 - -
Bma07g01648 1003 ProSiteProfiles Heavy-metal-associated domain profile. 194 263 IPR006121 GO:0046872
Bma07g01648 1003 ProSiteProfiles Heavy-metal-associated domain profile. 119 185 IPR006121 GO:0046872
Bma07g01648 1003 SUPERFAMILY HMA, heavy metal-associated domain 189 258 IPR036163 GO:0046872
Bma07g01648 1003 MobiDBLite consensus disorder prediction 18 36 - -
Bma07g01648 1003 Gene3D - 35 107 - -
Bma07g01648 1003 CDD P-type_ATPase_Cu-like 282 968 - -
Bma07g01648 1003 Pfam E1-E2 ATPase 424 644 - -
Bma07g01648 1003 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 601 952 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma07g01648 1003 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 574 992 - -
Bma07g01648 1003 Gene3D - 115 187 - -
Bma07g01648 1003 Pfam Heavy-metal-associated domain 122 181 IPR006121 GO:0046872
Bma07g01648 1003 Pfam Heavy-metal-associated domain 44 104 IPR006121 GO:0046872
Bma07g01648 1003 CDD HMA 46 106 IPR006121 GO:0046872
Bma07g01648 1003 SUPERFAMILY HMA, heavy metal-associated domain 116 186 IPR036163 GO:0046872
Bma07g01648 1003 PRINTS Copper-transporting ATPase 1 signature 96 116 - -
Bma07g01648 1003 PRINTS Copper-transporting ATPase 1 signature 67 90 - -
Bma07g01648 1003 PRINTS Copper-transporting ATPase 1 signature 142 163 - -
Bma07g01648 1003 PRINTS Copper-transporting ATPase 1 signature 41 66 - -
Bma07g01648 1003 PANTHER ATP7, ISOFORM B 574 992 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00880 Bma-Chr7:30132494 Bma07g01648 Bma-Chr7:52074438 0 dispersed
Bma07g01648 Bma-Chr7:52074438 Bma11g00286 Bma-Chr11:2630417 3.77E-15 dispersed
Bma07g01648 Bma-Chr7:52074438 Bma01g02192 Bma-Chr1:78803560 2.03E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01648 K17686 - cit:102615719 1315.44