Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01658 ATGACTAGGAATAATGGGTTCTTCGCAAAAGCCCACAATATTCAACAGCAAGAACAGATTTTCCGAGATGGGTTGGTCGGAAAAGTTGCAGATCTTCACCAACACGGCCAGTTTCACCTTGGGAACTCGAAATACTTGATTCCAACGCAGCAGCTTTTAAATGAATTCTGCAGCCTTGGATTGAGGCATGGCGATGGAGAGGAGAAGGGTCCTAAAACCAAACAGTGGGTTGAAGAAAATGCTACTGCTTCATTGAGGAAGCAGTCTCTTCAATCCCTTGATTTTATCGAATTACAGAAGAGAAAAACAAGGCTGTTTTCGATGATGGAAGAGCTGGAGCGTAGATACAGGCACTACTGCGACCAAATGAAAATGGTGGTGTCTTCGTTTGAAGCAGTGGCCGGAGAGGGAGCTGCGAATGTGTATTCGGCTTTGGCCTGCAAGGCTTTGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATAGTGACGCAGATTCAGGCTGTGAAGAAGGCGATGGGGGAGAGAGATCAGCAGGCTTCAGTGCCGGGGTGGTCAAAGGGTGAAACGCCGAGGCTGTGCATTCTGGATCAGACGCTTAGACGGCAAAGGGTTTTCCAGCAGATGAGCTTGATGGAGAGCCATCCATGGCGGCCCCAACGTGGCCTTCCTGAACGATCCGTTTCCATTCTCCGAGCTTGGCTGTTCGAGCACTTTCTTCACCCGTATCCAAGCGACGTAGATAAACATATTCTGGCCCGCCAAACTTCTCTCTCAAGAAGCCAGGTCTCCAACTGGTTCATTAATGCAAGAGTGAGGCTGTGGAAGCCAATGGTGGAAGATATGTACTTGGAAGAAGTAAAGGAGCAAGAAAACACCTTGACCTCCTCCGACGGAGGCATTGACGTCGACAACAGAGGAAGAGCACGGCCGGAAGATCAAAAGCCGACCGCCGACCAACTACTTAGAATCAACTCCGACTGCCTTTCCTCCATCATCAACAACCCACCAAAAAATGACACGAAACCCTCCAAAACCATGCAAAACCACCACCACCAACAACAGCAACAACAGAATTTGAGCTCATTTGGGATGATGGAGCTTGATTTCTCTTCCTACAATCCCCACTCATCCGGAGCTGTTTCCTACGCAAGTGACAGTCAAGTAAATCATAATTTCAATGGTGGCCGGGGCGGTGTCTCGTTGACACTAGGGTTGCAACAGCACGGCGGTAATGGGTCCGGGAGCTTAGCATTTTCTTCCCCACCTCAGACTAACTCTCTCTTCTACCCTAGAGATTCCATGGAAGAATGCCAACCAGCTGTTCACTACTCTCCTTTTGATGGAGAAGCTCAGAATTTGCCTTACAGAAACTTAATGGAGGCCCAGATGTTCAACGATTTGGCAGGATAA 1410 48.65 MTRNNGFFAKAHNIQQQEQIFRDGLVGKVADLHQHGQFHLGNSKYLIPTQQLLNEFCSLGLRHGDGEEKGPKTKQWVEENATASLRKQSLQSLDFIELQKRKTRLFSMMEELERRYRHYCDQMKMVVSSFEAVAGEGAANVYSALACKALSRHFRCLKDGIVTQIQAVKKAMGERDQQASVPGWSKGETPRLCILDQTLRRQRVFQQMSLMESHPWRPQRGLPERSVSILRAWLFEHFLHPYPSDVDKHILARQTSLSRSQVSNWFINARVRLWKPMVEDMYLEEVKEQENTLTSSDGGIDVDNRGRARPEDQKPTADQLLRINSDCLSSIINNPPKNDTKPSKTMQNHHHQQQQQQNLSSFGMMELDFSSYNPHSSGAVSYASDSQVNHNFNGGRGGVSLTLGLQQHGGNGSGSLAFSSPPQTNSLFYPRDSMEECQPAVHYSPFDGEAQNLPYRNLMEAQMFNDLAG 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 52164392 52166527 - Bma026954.1 Bma07g01658 86795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01658 469 MobiDBLite consensus disorder prediction 302 316 - -
Bma07g01658 469 SMART HOX_1 216 280 IPR001356 GO:0003677
Bma07g01658 469 CDD homeodomain 216 277 IPR001356 GO:0003677
Bma07g01658 469 Pfam Homeobox KN domain 233 272 IPR008422 GO:0003677|GO:0006355
Bma07g01658 469 MobiDBLite consensus disorder prediction 289 319 - -
Bma07g01658 469 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 5 420 - -
Bma07g01658 469 Coils Coil 95 115 - -
Bma07g01658 469 Pfam Associated with HOX 40 161 IPR006563 -
Bma07g01658 469 ProSiteProfiles 'Homeobox' domain profile. 213 276 IPR001356 GO:0003677
Bma07g01658 469 SMART prehox3 34 163 IPR006563 -
Bma07g01658 469 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 5 420 - -
Bma07g01658 469 SUPERFAMILY Homeodomain-like 217 282 IPR009057 -
Bma07g01658 469 MobiDBLite consensus disorder prediction 333 357 - -
Bma07g01658 469 Gene3D - 219 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01658 Bma-Chr7:52164392 Bma10g00129 Bma-Chr10:1167298 2.73E-79 dispersed
Bma14g00602 Bma-Chr14:6539299 Bma07g01658 Bma-Chr7:52164392 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57689 PF07526 POX 2.10E-41 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01658 - - pvy:116111178 631.328