Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01666 CAGAAGGCTAAACAAGGTAGCAGAAGGTTAATTTGTTCAGTCGCCGCAGATACGTTGCCCAAGAAAATTGAAGAATTTGAAATGGATGCACATAAGGAAATATTTTTGAAGGATTATAAGATGCCTGATTACTACTTTGATACAGTGGATTTAAATTTTTCGCTTGGCGAGGAGAAAACAATTGTTAGTTCCAGAATAACAGTGACACCACGAGTTGAAGGTTCTACTTCTCCTCTGGTTTTGGATGGACAAGAAGTGAAGTTGCTTTCAATTAAAGTCAACAATACAGAGCTTAAGGAGGATGATTACCAATTGAACTCACGCCATCTGAGACTTCTGTCACCACCATCTGGTCCATTTACTTTAGAAATTGTTACTGAGCTATTGCCTCAGAAGAACACATCATTAGAGGGACTTTACAAGTCTTCTGGTAATTTTTGCACACAATGTGAAGCGGAAGGCTTCCGTAAAATCACATTTTATCAGCAGGATCGCCCTGATATAATGGCAAAGTACACCTGTCGCATTGAAGCAGATAAGGAGTTATATCCAGTACTTCTCTCTAATGGAAATCTCGTGGATCATGGCGATTTAGAAGGTGGAAGACAATATGTTGTCTGGGAGGATCCTTTTAAAAAACCATGCTATTTGTTTGCTTTAGTTGCTGGACAATTGGTCAGCAGAGATGATGTTTTCATTACAAGATCAGGCAGAAAGGTCTCTCTACGGATATGGACCCCAGCTCAAGATCTGCCCAAGACTGCACATGCTATGTATTCACTTAAGGCGGCTATGAAATGGGATGAGGATGTTTTTGGCCTAGAATATGACCTGGACCTATTCAATATAGTGGCTGTTCCTGATTTTAACATGGGAGCAATGGAAAACAAGAGTTTGAATATCTTCAATTCAAAACTCGTATTGGCCTCACCAGAAACTGCTACAGATGCAGATTATGCTGCAATATTAGGTGTTATTGGTCATGAGTATTTCCACAACTGGACTGGCAACAGGTTAGTGACCTGTCGTGACTGGTTCCAGCTAAGTTTAAAGGAAGGTCTTACAGTTTTTCGCGATCAGGAATTCTCGTCTGACATGGGAAGCCGGACTGTAGAGCGGATTGCTGATGTTTCAAGACTTCGAAATTATCAGTTTCCACAGGATGCTGGCCCCATGGCTCATCCAGTTAGGCCACATTCATATATTAAGGTTAGCAATTACTTATTTTTGTATAATTATGTCCCAAAATTAATTGGTAGGATAATATATATTTCTATATTTCAGGGAATGGATCTATACTTCAAGAGACATGATGGTCAAGCTGTAACCTGTGAAGACTTTTTTGCAGCCATGCGAGATGCAAATAATGCAGATTTTGCTAACTTCTTGCAATGGTACTCTCAAGCTGGGACACCTCTCGTCAAAGTGACTTCATCTTACGACTCTGAAGCTCGTACTTTCTCTTTAAAGTTTAGTCAAGTGGTGCCGCCAACCCCTGGGCAGCCAGTTAAAGAACCGATGTTTATACCAGTGGCTTTAGGCTTGCTAGATTCAAAGGGCAAGGACCTGCCTCTTTCCTCTGTCTGTCATGATGGGATGCTGCAGTTGGTTTCTGGCAATGATCAGCCAGTTTATTCCACAGTTCTTCGGGTGACCAAAAAAGAAGAAGAATTTGTATTTTCTGATGTACCTGAGCGGCCAGTTCCGTCACTGTTGCGGGGTTATAGTGCTCCTATCCGTCTCGAATCAGATCTATGCGACAGTGACCTATTTTTCCTTCTTGCCCATGATTCAGACGAGTTTAATCGGTGGGAGGCAGGACAAATACTGGCTCGAAAGTTGATGCTCGGCTTGGTGGCTGACTTCCAACAAAATAAGCCATTGACGCTTAATTCAAAGTTTGTGAATGGGATGAGAAGCATACTCTGTGACTCAAGCTTAGATAAAGAGTTCATTGCAAAGGCAATAACTCTACCTGGTGAAGGAGAAGTAATGGACATGATGGACGTTGCAGATCCTGATGCAGTCCATGCCGTTCGATCATTCATACGGAAGCAGCTAGCTTGTGAGCTGAAAGCGGAGCTTCTTTCCACTGTCGAAAAGAACAGAAGCTCGGAACAGTATGAGTTTAACCATGCTGACATGGCTAGACGCGCCCTTAAAAATACGTCATTGTCTTATCTTGCATCTCTTGAAGAGGCGGAATTTGCAGATCTGGCTCTTCATGAGTACAGAACGGCCACAAATATGACTGAACAATTTTCAGCTTTAGCCGCCATAGCCCAGAATCCGTGTAAAACCCGTGATGATGTTCTAGCCGATTTCTTTGACAAGTGGCAGCATGACTTCTTAGTTGTGAACAAATGGTTTGCTCTTCAAGCCATGTCTGACATTCCTGGAAATGTAGAACATGTTGGGAAGCTCCTAGACCACCCAGCTTTTGATCTGCGAAATCCGAACAAAGTATACTCCCTCATTGGAGGTTTTTGTGGGTCCCCAGTGAATTTCCATGCAAAGGATGGATCAGGCTACAAGTTTTTGGGAGAGAAAGTTCTTCAACTTGACAAAATAAATCCTCAAGTTGCATCCCGAATGGTCTCCGCATTCTCAAGATGGAAACGATATGACGAGACCCGACAAAAACTGGCAAAGGCACAGCTTGAGATGATAATGGCTTCCAATGGACTGTCTGAAAATGTGTTTGAAATTGCCTCCAAAAGTTTAGCTGCTTAA 2733 42.37 QKAKQGSRRLICSVAADTLPKKIEEFEMDAHKEIFLKDYKMPDYYFDTVDLNFSLGEEKTIVSSRITVTPRVEGSTSPLVLDGQEVKLLSIKVNNTELKEDDYQLNSRHLRLLSPPSGPFTLEIVTELLPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQQDRPDIMAKYTCRIEADKELYPVLLSNGNLVDHGDLEGGRQYVVWEDPFKKPCYLFALVAGQLVSRDDVFITRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRLVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVERIADVSRLRNYQFPQDAGPMAHPVRPHSYIKVSNYLFLYNYVPKLIGRIIYISIFQGMDLYFKRHDGQAVTCEDFFAAMRDANNADFANFLQWYSQAGTPLVKVTSSYDSEARTFSLKFSQVVPPTPGQPVKEPMFIPVALGLLDSKGKDLPLSSVCHDGMLQLVSGNDQPVYSTVLRVTKKEEEFVFSDVPERPVPSLLRGYSAPIRLESDLCDSDLFFLLAHDSDEFNRWEAGQILARKLMLGLVADFQQNKPLTLNSKFVNGMRSILCDSSLDKEFIAKAITLPGEGEVMDMMDVADPDAVHAVRSFIRKQLACELKAELLSTVEKNRSSEQYEFNHADMARRALKNTSLSYLASLEEAEFADLALHEYRTATNMTEQFSALAAIAQNPCKTRDDVLADFFDKWQHDFLVVNKWFALQAMSDIPGNVEHVGKLLDHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEKVLQLDKINPQVASRMVSAFSRWKRYDETRQKLAKAQLEMIMASNGLSENVFEIASKSLAA 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 52235690 52241864 + Bma026963.1 Bma07g01666 86803

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01666 910 Pfam Domain of unknown function (DUF3458_C) ARM repeats 587 909 IPR024601 -
Bma07g01666 910 Gene3D - 470 583 IPR038438 -
Bma07g01666 910 TIGRFAM pepN_proteo: aminopeptidase N 38 908 IPR012779 GO:0008270
Bma07g01666 910 PANTHER - 428 910 IPR012779 GO:0008270
Bma07g01666 910 PANTHER - 3 412 IPR012779 GO:0008270
Bma07g01666 910 CDD M1_APN 38 467 - -
Bma07g01666 910 Pfam Peptidase family M1 domain 259 464 IPR014782 GO:0008237|GO:0008270
Bma07g01666 910 Gene3D - 227 310 - -
Bma07g01666 910 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 33 223 IPR042097 -
Bma07g01666 910 Pfam Peptidase M1 N-terminal domain 42 217 IPR045357 -
Bma07g01666 910 Gene3D - 586 909 IPR037144 -
Bma07g01666 910 Gene3D tricorn interacting facor f3 domain 41 225 IPR042097 -
Bma07g01666 910 Gene3D Neutral Protease Domain 2 311 469 IPR027268 -
Bma07g01666 910 Pfam Domain of unknown function (DUF3458) Ig-like fold 470 583 IPR035414 -
Bma07g01666 910 PANTHER BNAC06G01820D PROTEIN 428 910 - -
Bma07g01666 910 PANTHER BNAC06G01820D PROTEIN 3 412 - -
Bma07g01666 910 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 235 476 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01666 K01256 pepN; aminopeptidase N [EC:3.4.11.2] - pvy:116134076 1512.28
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01666 Bma-Chr7:52235690 Bma07g01667 Bma-Chr7:52253858 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g302 . . . . . . Bma07g01666 . . . Cma02g01441 . Car02g01208 . . . Cpe05g00346 . . . . . . . . . . . . . . Cone8ag0292 Cone12ag0298 . . . Csa05g00269 Chy09g01240 . . . . Bda09g00031 . . . . . Cmo02g01477 Cmo15g01300 . . . . . Cpe13g00149 Bhi12g00279 . . Lac11g2075 Hepe06g1533 . Lcy12g1636 Cla01g00252 Cam01g0258 Cec01g0250 Cco01g0263 Clacu01g0256 Cmu01g0245 Cre09g2264 Lsi09g00243 . . Cme09g01774
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004484 2 1 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 2 1 2 1 1 1 1 2 1 2 42