Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01675 ATGGGATATTGTCTACCTACTGCCAAGGGTGCAGCTGAAACCCTGAAGTTCAACATGGCTCTTATTTTACTGCCTGTATGCAGGAACACCATAACTTGGCTTAGGTCCACCAAGTTAGGCCACTTTGTTCCTTTTGACGACAACATTAATTTTCACAAGACGATTGCAGCAGTCATCATACTAGGTGTCATTCTTCATGCAGGAAATCACCTTGCATGTGACTTTCCGAGGCTAATAGACTCAGTCTGA 249 43.78 MGYCLPTAKGAAETLKFNMALILLPVCRNTITWLRSTKLGHFVPFDDNINFHKTIAAVIILGVILHAGNHLACDFPRLIDSV 82
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 52310148 52310610 + Bma026972.1 Bma07g01675 86812

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01675 82 PANTHER RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E 1 81 - -
Bma07g01675 82 Pfam Ferric reductase like transmembrane component 10 77 IPR013130 -
Bma07g01675 82 PANTHER NADPH OXIDASE 1 81 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01675 K13447 RBOH; respiratory burst oxidase [EC:1.6.3.- 1.11.1.-] - pop:18097047 158.688
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma07g01675 Bma14g00618 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00618 Bma-Chr14:6679680 Bma07g01675 Bma-Chr7:52310148 5.52E-23 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g53 . . . . . . Bma07g01675 Bma14g00618 . Cmo16g00626 Cma02g01421 Cma15g01255 Car02g01190 Car15g01132 . Cpe14g00488 Cpe05g00364 . . . . . . . Cla07g00739 Cam07g0792 Cec07g0857 Cco07g0827 Clacu07g0773 Cmu07g0782 Cre07g1133 Cone8ag0272 Cone12ag0279 Cone6ag0817 . . Csa05g00235 Chy09g01265 Cme07g01609 . Blo19g00348 Bda07g00473 Bda09g00023 . Bpe11g00651 . . . Cmo02g01454 Cmo15g01321 . Cma16g00577 . . . Cpe13g00130 Bhi12g00182 . . Lac11g2040 Hepe06g1508 . Lcy12g1604 Cla01g00224 Cam01g0232 Cec01g0223 Cco01g0233 Clacu01g0227 Cmu01g0220 Cre09g2290 Lsi09g00211 Csa04g00616 Chy07g01195 Cme09g01804
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0021544 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3