Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01678 ATGGATTTCTCTGTGATTTTCTTTCTGGGTATAATGTTTTGGCTGAGTAATGCAGACCCAGTTCAAGATAAGCAAGCTTTGCTTGAGTTCATGACCAATCTCCCTCACTCTCGCTACCTCAATTGGAACGACAACTCTCCGGTTTGCAACAACTGGACTGGTATAACCTGCAGTAAGGGTAATGCGCGCGTCATCGCCGTCCGTTTGCCTGGCGTCGGTTTTGACGGTCCTATTCCGGCCAACACTCTTAGCCGACTCTCGGCTTTGCAAACTTTGAGTCTCAGATCTAATGGTATTACCGGAAACTTCCCTTCTGATTTTTCTAATCTCAGAAACTTGTCCTTTCTTTATCTTCAATTCAATAACTTCTCCGGCCCGTTGCCGTTTGATTTCTCTGTCTGGAGGAACCTCACATTCATTAATCTATCAAATAATGGCTTCAATGGAACTATTCCCTCTTCGCTTTCTAATTTGACGCAGCTCAATGGTTTGAATCTCGCGAACAACTCATTTTCTGGAGAGATTCCGGACCTCAATTCGCTCAGATTACAAACGCTTGATTTGTCTAACAATCAACTGATGGGTGATGTTCCTCTATCACTCCATAGGTTCCCCAGGTCAGTGTTTGACGGAAATAACATCTCTTTTCAAAGTTTTGCGCCAGATCTTTCTCCAGTGTCTCCGCTTCCTTCTGAACCATACGAGAAACCACGGAACAGCATAGGGAAGCTCGGCGAAAAGGCATTGCTAGCAATTATAGTTGCCGGAGCTCTTTTGGGGCTTTTAGCATTTGGATTTCTGATACTTGTTTGCTGCTCCAGAAGGAAAAAGAGAGATGAGTTGGCAGGGAATTTGCAGAAAGGAGAAATGTCGCCGGAAAAAGTGATAGCGAGGAGCCAAGATGCGAATAACAGGTTGGTGTTTTTCGAGGGGTGTAACTATGCATTTGACTTGGAAGATTTGCTAAGAGCTTCTGCAGAGATTCTGGGAAAGGGGACATTTGGTACTGCTTACAGGGCCATTCTTGAGGATGCAACCAGAGTTGTGGTGAAGAGATTGAAGGAAGTAAGTGTGGGGAAGCGAGAGTTTGAACAGCAGATGGGGATTGTTGGAAGCATAAGGCATGAGAATGTGGTTGAGTTGAAGGCTTATTATTACTCCAAGGATGAGAAGCTCATGGTCTATGAATATTACACTCAAGGCAGTGTCTCTGCAATGCTGCATGGTAAAAGAGGGGAGGATATAGTCCTCTTTCGACTGGAATTCTCGGCTGCGGATAGCCGTTGGTGCTGCAAGAGGTATATCTCGGATTCACAAAGAGAATGGAGGGAAGCTTGTACATGGCAACGTGAAGTCTTCGAATATCTTTATCAATTCTAG 1380 44.71 MDFSVIFFLGIMFWLSNADPVQDKQALLEFMTNLPHSRYLNWNDNSPVCNNWTGITCSKGNARVIAVRLPGVGFDGPIPANTLSRLSALQTLSLRSNGITGNFPSDFSNLRNLSFLYLQFNNFSGPLPFDFSVWRNLTFINLSNNGFNGTIPSSLSNLTQLNGLNLANNSFSGEIPDLNSLRLQTLDLSNNQLMGDVPLSLHRFPRSVFDGNNISFQSFAPDLSPVSPLPSEPYEKPRNSIGKLGEKALLAIIVAGALLGLLAFGFLILVCCSRRKKRDELAGNLQKGEMSPEKVIARSQDANNRLVFFEGCNYAFDLEDLLRASAEILGKGTFGTAYRAILEDATRVVVKRLKEVSVGKREFEQQMGIVGSIRHENVVELKAYYYSKDEKLMVYEYYTQGSVSAMLHGKRGEDIVLFRLEFSAADSRWCCKRYISDSQREWREACTWQREVFEYLYQF 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 52362916 52364449 + Bma026975.1 Bma07g01678 86815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01678 459 PANTHER OS05G0588300 PROTEIN 14 415 - -
Bma07g01678 459 ProSiteProfiles Protein kinase domain profile. 323 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01678 459 SUPERFAMILY L domain-like 32 204 - -
Bma07g01678 459 Pfam Protein tyrosine and serine/threonine kinase 327 412 IPR001245 GO:0004672|GO:0006468
Bma07g01678 459 Gene3D Ribonuclease Inhibitor 133 225 IPR032675 -
Bma07g01678 459 Gene3D Ribonuclease Inhibitor 22 132 IPR032675 -
Bma07g01678 459 SUPERFAMILY Protein kinase-like (PK-like) 327 412 IPR011009 -
Bma07g01678 459 ProSitePatterns Protein kinases ATP-binding region signature. 329 360 IPR017441 GO:0005524
Bma07g01678 459 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Bma07g01678 459 Gene3D Phosphorylase Kinase; domain 1 290 397 - -
Bma07g01678 459 PANTHER PROTEIN, PUTATIVE-RELATED 14 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01678 Bma-Chr7:52362916 Bma08g01217 Bma-Chr8:51208071 2.19E-110 dispersed
Bma07g01678 Bma-Chr7:52362916 Bma01g00415 Bma-Chr1:3475932 1.31E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66644 PF07714 PK_Tyr_Ser-Thr 5.30E-11 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01678 - - zju:107430123 630.172