Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00026 ATGTACGGAAGAAAGGCATTTCAGCTGCTGAAGGAGCTTTCAACTAGCGAGAAGGGGCAGTTGAAGCTCTTCAATAGTGATCTTTTTGACCAAGTGATTGCAGAATGTAATCAACATCACCTCGAGCTTCAGTTCTTGATAAGGAAAATGCAGGAAGAAGGAATGGATCTTCAGACAACTAAAAACGCAGACCACTTTGGGGCACTCATTCACCACCTTGCTTTAGTCCGGAATAAACGCTGTTTGATGACATATGCCTACAATCGAGCTGAATTCACCCGGAGTTTGATGTGGAAGGTAGGAACCGTGCTTCCACAAGAAATTGAAGTAAAGCTCAGCCACTCGGAGGAGGAGTATTTTAAGAAACACTCTGCAGCTCTGAAATCATTTATGTCAAGACTGGAACTTGATTTAACTGTGGATATGGTGCCACCCAAAGATCCTTATATCCAGGTTAGAGTTCTCGATGATATTGGAGAAGGAATTGTCCTCAGTGATGATAAGACAGCAAATTTTGCTCGACATTCAATGCACTTTCTTAAACGAACCGATGCCGAGCAGTTCATTTCTCGAGTAAGATAG 582 42.61 MYGRKAFQLLKELSTSEKGQLKLFNSDLFDQVIAECNQHHLELQFLIRKMQEEGMDLQTTKNADHFGALIHHLALVRNKRCLMTYAYNRAEFTRSLMWKVGTVLPQEIEVKLSHSEEEYFKKHSAALKSFMSRLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSMHFLKRTDAEQFISRVR 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 424444 426768 + Bma027018.1 Bma08g00026 86853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00026 193 Pfam GINS complex protein 48 116 IPR021151 -
Bma08g00026 193 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Bma08g00026 193 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811|GO:0006260
Bma08g00026 193 Gene3D - 1 134 - -
Bma08g00026 193 PANTHER PARTNER OF SLD5 1 192 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00026 Bma-Chr8:424444 Bma14g00698 Bma-Chr14:7592368 2.96E-144 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00026 K10732 - qsu:112021696 320.472