Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00026 | ATGTACGGAAGAAAGGCATTTCAGCTGCTGAAGGAGCTTTCAACTAGCGAGAAGGGGCAGTTGAAGCTCTTCAATAGTGATCTTTTTGACCAAGTGATTGCAGAATGTAATCAACATCACCTCGAGCTTCAGTTCTTGATAAGGAAAATGCAGGAAGAAGGAATGGATCTTCAGACAACTAAAAACGCAGACCACTTTGGGGCACTCATTCACCACCTTGCTTTAGTCCGGAATAAACGCTGTTTGATGACATATGCCTACAATCGAGCTGAATTCACCCGGAGTTTGATGTGGAAGGTAGGAACCGTGCTTCCACAAGAAATTGAAGTAAAGCTCAGCCACTCGGAGGAGGAGTATTTTAAGAAACACTCTGCAGCTCTGAAATCATTTATGTCAAGACTGGAACTTGATTTAACTGTGGATATGGTGCCACCCAAAGATCCTTATATCCAGGTTAGAGTTCTCGATGATATTGGAGAAGGAATTGTCCTCAGTGATGATAAGACAGCAAATTTTGCTCGACATTCAATGCACTTTCTTAAACGAACCGATGCCGAGCAGTTCATTTCTCGAGTAAGATAG | 582 | 42.61 | MYGRKAFQLLKELSTSEKGQLKLFNSDLFDQVIAECNQHHLELQFLIRKMQEEGMDLQTTKNADHFGALIHHLALVRNKRCLMTYAYNRAEFTRSLMWKVGTVLPQEIEVKLSHSEEEYFKKHSAALKSFMSRLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSMHFLKRTDAEQFISRVR | 193 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 424444 | 426768 | + | Bma027018.1 | Bma08g00026 | 86853 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00026 | 193 | Pfam | GINS complex protein | 48 | 116 | IPR021151 | - | |
Bma08g00026 | 193 | SUPERFAMILY | GINS helical bundle-like | 1 | 146 | IPR036224 | - | |
Bma08g00026 | 193 | CDD | GINS_A_psf1 | 3 | 136 | IPR005339 | GO:0000811|GO:0006260 | |
Bma08g00026 | 193 | Gene3D | - | 1 | 134 | - | - | |
Bma08g00026 | 193 | PANTHER | PARTNER OF SLD5 | 1 | 192 | IPR005339 | GO:0000811|GO:0006260 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00026 | Bma-Chr8:424444 | Bma14g00698 | Bma-Chr14:7592368 | 2.96E-144 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00026 | K10732 | - | qsu:112021696 | 320.472 |