Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00034 TGGAGAGAGTGTTATTTATCCAACTATGCACCTTTCATCAGGAGTAGATCTCGGATTCATGCGGCCCTTGATGTTGCAAGTGCTATTGATGTAATTAATGATTTAGGATTGGATACACTAACATTTTTAGCCGTGACAGTGCTTGTTGTTCCTGCATTCAGAATTGTTAAAGCTAGCCCAATTCTTGGTTTCTTCTTTGCTGGAGTTGTGCTGAACCAATTTGGCGCGATCAGAAATCTTACTGATGTTAAAATCCTTTCTGAGTGGGGAATCCTTTTTCTGCTGTTTGAAATGGGTTTAGAACTCTCATTTGCCCGTTTGAAGGCTCTGGCAATATTTGCCTTCGGCATGGGATTGCCTCAGGTGGTGCTATCCACTCTTGCTTTCACTGCCTTTGAACTCCCTCCTAATGGAGCCGTTGGAACAAGAATCCTAGAGTTTCTTTTTCACTCGAGGCCTGATTTGGTTAACATAAGAAGTGTTGATGAAGCTATAGTGATTGGTGCTGCACTCTCGTTGTCTTCTTCAGCTTTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCAACAAGATTTGGATCGGCAACGTTGGGGATACTTCTTCTACAGGACATTGCAGTTGTCCCGCTCTTAGTCATTCTTCCAGTGCTAGAGAGCCAGAATTTGGTCCAGGAAAGTATCTGGCCAATGCTTGCCCAAGAAAGCTTAAAGGCTTTGGGTGGACTGGGTCTGCTTTCTCTTGGAGGAAAATTTCTTCTTAGGCGAGTCTTTGAGGTAGTTGCTGAAGCCAGGAGTTCTGAAGCCTTTGTTGCTCTCTGCTTGCTGACAGTTGCTGGAACTTCACTTATTACCCAGAAGTTGGGTTTCAGTGATACGCTCGGAGCATTTTTAGCTGGAGCAATCTTAGCAGAAACAAATTTTCGAACACAGATTGAAGCAGATATTAGGCCATTTCGAGGCTTACTGCTGGGTTTATTTTTTGTGACTACTGGAACTTCCATCGACATGCAGGTTCTTTTCCGAGAGTGGCCGAATGTACTTTCACTTTTGGCAGGACTAATAGTAATAAAGACAATGATAATAACAGCAATAGGTCCCCGTGTTGGATTGACTTTACAAGAAAGTGTAAGAATTGGATTACTTCTTTCTCAGGGAGGCGAGCTTGGAGTGTTACCTCTTGAGCTTAACAAGCTTCTTATCATTGTTGTTGTGCTATCCATGGCATTAACTCCATTGCTTAATGAAGCTGGAAGAAAGGCTGCTGAATTGATAGACGGCAAGGTTGAACCAGAAAGTAAAACTAAGGAGACTGTAAATTTTGATGCAACGGAGCCTATTGTGATTCTTGGGTTTGGGCAAATGGGTCAGGTCCTAGCAAATTTCTTGTCTGCACCATTGGCTTATGGAGAAGATGGTAATGGTGTAGGATGGCCCTATGTTGCTTTTGATCTTGATCCTTCTGTTGTGAAGGCATCTAGAAAACTTGGTTTTCCTATTCTCTACGGGGATGGATCAAGCCCTATAGTTTTGCAATCTGCTGGAATTTCTTCGCCCAAAGCTGTAATGGTTATGTACACAGGGCGTAAGAGAACGATCGAGGCTGTTCAGAGGCTTCGAATTGCATTCCCTGCCATTCCAATTTATGTTAGAGCTAAAGACCTCATGCATCTGTTAGATTTGAAGAAAGCAGGTGCAACAGATGCTATTCTTGAAGATGCAGAGATTCCAATTTATGTTAGAGCTAAAGACCTCATGCATCTGTTAGATTTGAAGAAAGCAGGTGCAACAGATGCTATTCTTGAAGATGCAGAGACAAGTTTACAATTGGGTTCTAGGCTTTTGAAAGGGCTAGGTGTCATGTCAGATGATGTGACTTTCCTAAGTCAGCTCGTTCGAGACTCCATGGAGTCACAAGCTCAAGAAGCACTCAGCAAAACCAATGAGCGGGAGCGGGAGCAGGAGTTAGATATTATGCGGCCGTTACAGGTTTTACATCCAGAATTTGTCAATTTTGTCTTATTTCTGTTAAACACCATCTACTTGGTGGAAAAATTAAGGGGTTACTTTAGTTGA 2076 42.73 WRECYLSNYAPFIRSRSRIHAALDVASAIDVINDLGLDTLTFLAVTVLVVPAFRIVKASPILGFFFAGVVLNQFGAIRNLTDVKILSEWGILFLLFEMGLELSFARLKALAIFAFGMGLPQVVLSTLAFTAFELPPNGAVGTRILEFLFHSRPDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPVLESQNLVQESIWPMLAQESLKALGGLGLLSLGGKFLLRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQVLFREWPNVLSLLAGLIVIKTMIITAIGPRVGLTLQESVRIGLLLSQGGELGVLPLELNKLLIIVVVLSMALTPLLNEAGRKAAELIDGKVEPESKTKETVNFDATEPIVILGFGQMGQVLANFLSAPLAYGEDGNGVGWPYVAFDLDPSVVKASRKLGFPILYGDGSSPIVLQSAGISSPKAVMVMYTGRKRTIEAVQRLRIAFPAIPIYVRAKDLMHLLDLKKAGATDAILEDAEIPIYVRAKDLMHLLDLKKAGATDAILEDAETSLQLGSRLLKGLGVMSDDVTFLSQLVRDSMESQAQEALSKTNEREREQELDIMRPLQVLHPEFVNFVLFLLNTIYLVEKLRGYFS 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 512580 526446 + Bma027028.2 Bma08g00034 86861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00034 691 Pfam Sodium/hydrogen exchanger family 41 391 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bma08g00034 691 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 575 650 - -
Bma08g00034 691 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 14 575 - -
Bma08g00034 691 Pfam TrkA-N domain 447 570 IPR003148 GO:0006813
Bma08g00034 691 Gene3D - 34 423 IPR038770 -
Bma08g00034 691 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 575 650 - -
Bma08g00034 691 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 14 575 - -
Bma08g00034 691 Gene3D - 446 574 - -
Bma08g00034 691 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 447 574 IPR036291 -
Bma08g00034 691 ProSiteProfiles RCK N-terminal domain profile. 446 576 IPR003148 GO:0006813
Bma08g00034 691 Gene3D - 575 645 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00034 Bma-Chr8:512580 Bma12g01144 Bma-Chr12:43905639 9.22E-21 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00034 - - mnt:21393720 979.548