Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00058 ATGACAACTCCTCTCTCTCCAGTTTGTCTCACAACCGCCGCGATGGTCACCATCTTCTTCGTCTCCCTCACGTTTTGCAGCGCCGCCGCCGCCGCCTTTTCCGACGAGTGCGGAGCTGATCTGAACAACATCACGGACCCTTTCTGGGGTCTGAAGGGATTAAAACTCCACTGCTCCGATGGTCGGATCTCCGCCATTTCCATGGATGATTTCTCCTTCCGTGTTCTCGAAATCAACCAATCCGCCCAAACTATTATAGTTGCTCGCTCGGACCCATTAGCCGAAACTTGCCCATTTCCTGTCATTCCTGAAAATTCTCGTAATCTCACCATCTTCTTCAATTGCAGCCAAACTGACGATCAAAAGTGCAGAAACCAGACAGTAAAATTGAAACAGAGGATTTGCGACCACTGCCAGAAATCCGGTGGAGATTGCGGATTAAACGATGACACTTCTCTTCACTGTATTTGCCATGGCCATCAGGAAGCTCGCCGTCTCTTGTACGATAGTCCCCCTCCCCCTGATAACGAATCAGAAGAACCAGACGTGACAACAAAGGTGATTATAGGTGTTAGCTGTAGTTCTGGATCAATGCTTTTAATGGGAATCTCATTCTTGATTTGGCGATGCTACCAGAGAAAGAAGTCCAGTCCATCGTCCGTAATCTCCCGAAGCATCTCTTCTGATCGATCATCACTGAACCGTGCGGAGAAAGGCGATTCCTACTGCAATGTACATCTCTTCTCCTATCATGAAATTGAGCAAGCCACTGACAAATTCAGTCCATCTAGAGAAGTTGGAGATGGAGGCTTTGGAGCAGTTTACTATGGACGACTCCAAGACGGGCGAGCCGTTGCCGTTAAACGCCTATATGAGAACAACTATAAGAGAGTCGAACAGTTTAAAAACGAAGTCGAGATCCTCGCTCGTTTACGACATCAAAATCTCGTGTCGCTTTACGGCTGCACTTCCCTCCGTAGTCGTGAACTATTGCTCGTGTATGAATATGTTCCTAACGGCACCATTGCCGATCACCTTCACGGAGATCGAGCAAACCCAAGTGAGTTTCAATGGCCGACGAGAATGAGAATTGCTATAGAGACTGCAAGTGCATTGGTTTACCTCCATGCTTCGGATATTATTCATCGCGACATAAAGACCAGTAACATTTTACTAGACGACCATTTTCGTGTCAAAGTAGCAGATTTTGGAATTTCACGACTGTTTCCGGCTGATATCACTCATGTTTCGACCGCTCCCCAAGGAACTCCCGGCTATGTCGATCCAGAGTATCACCAGTGCTACCAGCTTACGGAGAAGAGTGACGTGTACAGCTTTGGGGTGGTCTTAGTGGAGCTTATATCTTCGAAGCCTGCAGTTGATATAACGAGACATCGACATGAAATCAATCTTTCAACGATGGCGATAAATAAGATCCAAACTGGGGCCCTGCATGAGCTAGTCGACCCGTCTCTAGGGTTCGAATCCGATCATGAAGTCCGGAAAATGGTGACTTTGGTGGCAGAGCTGGCATTTATGTGCTTGCAGGGTGGGAAGGAGGCAAGACCCTCCATGGTTGAGGTGTTTGAGACTCTGCAGAGCATACAGAATAAGAAGTACAAGAAAGAGAGTGCGGAAGAGATCAATATTACGGCAGAAGATGCCGTGCTTTTGACGACTGATCCACCGCCATTTTCTCCCGTTTCTGTAACTATGCAGAAGAGCTCCGACGAAAGAAGTTCCGGTCGATTTGATCATTGA 1761 47.47 MTTPLSPVCLTTAAMVTIFFVSLTFCSAAAAAFSDECGADLNNITDPFWGLKGLKLHCSDGRISAISMDDFSFRVLEINQSAQTIIVARSDPLAETCPFPVIPENSRNLTIFFNCSQTDDQKCRNQTVKLKQRICDHCQKSGGDCGLNDDTSLHCICHGHQEARRLLYDSPPPPDNESEEPDVTTKVIIGVSCSSGSMLLMGISFLIWRCYQRKKSSPSSVISRSISSDRSSLNRAEKGDSYCNVHLFSYHEIEQATDKFSPSREVGDGGFGAVYYGRLQDGRAVAVKRLYENNYKRVEQFKNEVEILARLRHQNLVSLYGCTSLRSRELLLVYEYVPNGTIADHLHGDRANPSEFQWPTRMRIAIETASALVYLHASDIIHRDIKTSNILLDDHFRVKVADFGISRLFPADITHVSTAPQGTPGYVDPEYHQCYQLTEKSDVYSFGVVLVELISSKPAVDITRHRHEINLSTMAINKIQTGALHELVDPSLGFESDHEVRKMVTLVAELAFMCLQGGKEARPSMVEVFETLQSIQNKKYKKESAEEINITAEDAVLLTTDPPPFSPVSVTMQKSSDERSSGRFDH 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 741666 744042 + Bma027054.1 Bma08g00058 86885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00058 586 Gene3D Phosphorylase Kinase; domain 1 232 336 - -
Bma08g00058 586 SMART serkin_6 260 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00058 586 Gene3D Transferase(Phosphotransferase) domain 1 337 557 - -
Bma08g00058 586 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Bma08g00058 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Bma08g00058 586 SUPERFAMILY Protein kinase-like (PK-like) 241 533 IPR011009 -
Bma08g00058 586 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 127 573 IPR044652 -
Bma08g00058 586 MobiDBLite consensus disorder prediction 559 586 - -
Bma08g00058 586 ProSiteProfiles Protein kinase domain profile. 260 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00058 586 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 127 573 - -
Bma08g00058 586 Pfam Protein kinase domain 263 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00049 Bma08g00058 CCT
Bma06g00049 Bma08g00058 ECH
Bma03g00899 Bma08g00058 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01132 Bma-Chr1:11959396 Bma08g00058 Bma-Chr8:741666 9.02E-151 dispersed
Bma06g00049 Bma-Chr6:825598 Bma08g00058 Bma-Chr8:741666 3.55E-155 dispersed
Bma08g00058 Bma-Chr8:741666 Bma14g01106 Bma-Chr14:13884990 1.52E-174 dispersed
Bma08g00058 Bma-Chr8:741666 Bma03g00899 Bma-Chr3:8936250 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66645 PF00069 Pkinase 9.70E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00058 - - ghi:107888776 551.592