Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00071 TTTTTTTTGAGAATGACGAATGAGGTTCCTAAGATGCTCTTCCTTTTCCTTTTCTTCCTCGTTTTCGTCCGGAATTCTCGCGCTCACAAGCTCGCTCCTGCTCTGTACGTATTTGGAGACTCGACTCTCGATGCCGGCAACAACAACAACACCAAACTAAAATCGATTCTCCCCTACGGCGTGGATTTTCCTGGAAATCATTCCGGCCGGCTCACCAATGGCTACAATATGGCTGATTTTTTCGCTGAATGGCTCGGATTAGAGCTTCCACCTCCGTATATTCGAGTATACGACAACAAATGCAAGAAGAACATAACCGAGGGTATAAACTTTGCAATTGTTGGAGCTACGATCGTCAATGCCAGCAACGGATTCTTCGGCGACACTGTAAGAACATTAGACCAATTTAGAGAAACTGTTGAAGAATATTTGCCTACGAGATTGACATGCAATCAAACTGTTTCACAGCACTTGGCCAACTCCATTTTCATGCTCTCTATTGGTGGGAATGATTATTTGCTTAACTATGTTCCAACTTTGGGATCCCCGGACAGCCTTAATGCCTCGGAGTTTGCCGATAAAGTCGTCGACCAACTCGGTATTTCTTTGAAGCATTTGATGCCATTTGTTGAAAGGGAGAAGTTTCAGATCTCATCTGAGTGTAGACTTCATGCCGACAATGATTTGTTTAGAGATCAAGAGCAACACAAGATACACATGGATATAAATGAATGGCAGTGTGGATACTGTAAGAAGAGCTTTCGTGGCGAAAAATTTCTTGATCAGCACTTTGACAACCGACATTATAATCTCCTTAATGTCAGCAATGACAAGTGCTTAGCAGATTTATGTGGAGCATTACATTGTGATGTCATGATGAACACAAAGTCAGCCAAATCAAAATGCAACCCTGCTGCAGCTGCCAGGAACCAACATCTATGTGAAGTTGGTTTTGAGTATTTTACTTTTCTTTTTTATTTTTATCTTTATTTTGGGTTGTATTTTATTTTAATTTCTTTGCAGAGTCTGGCTAATAGTTGCTTCCCTATTAGTCAAGGTGCTTCTGCAAGTCGACTTCACGAGCTGTTTTTGCGGCAATTTTGCGATGCTCATTCTTGCTCGGGAAAACACAAACCTTTTTCAAGAGGAGGAAAAAAGCAAAAAAGTGTGCTCTACCTCGCAACTTCGATTCTCACTCTGATGCTGCTTCCCATTTTCTACGTAGTAGTGTATTTGCACCAGAGGTACTATTTTTTTCGCAACCCTGTCGACCATACGGTGATTTTTAATCCGTTCCGTGTTTATGTATTTGCCAGGGAGCTGAAGAACGGGAGACAAGAGCTCCGGCGAATCTCGAAAGTTGGGCAGAAAACGAAACCTTCGTAA 1386 41.99 FFLRMTNEVPKMLFLFLFFLVFVRNSRAHKLAPALYVFGDSTLDAGNNNNTKLKSILPYGVDFPGNHSGRLTNGYNMADFFAEWLGLELPPPYIRVYDNKCKKNITEGINFAIVGATIVNASNGFFGDTVRTLDQFRETVEEYLPTRLTCNQTVSQHLANSIFMLSIGGNDYLLNYVPTLGSPDSLNASEFADKVVDQLGISLKHLMPFVEREKFQISSECRLHADNDLFRDQEQHKIHMDINEWQCGYCKKSFRGEKFLDQHFDNRHYNLLNVSNDKCLADLCGALHCDVMMNTKSAKSKCNPAAAARNQHLCEVGFEYFTFLFYFYLYFGLYFILISLQSLANSCFPISQGASASRLHELFLRQFCDAHSCSGKHKPFSRGGKKQKSVLYLATSILTLMLLPIFYVVVYLHQRYYFFRNPVDHTVIFNPFRVYVFARELKNGRQELRRISKVGQKTKPS 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 885030 890685 + Bma027070.1 Bma08g00071 86898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00071 461 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 204 315 - -
Bma08g00071 461 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 341 415 - -
Bma08g00071 461 ProSitePatterns Zinc finger C2H2 type domain signature. 247 268 IPR013087 -
Bma08g00071 461 PANTHER ZINC FINGER PROTEIN-RELATED 204 315 - -
Bma08g00071 461 PANTHER ZINC FINGER PROTEIN-RELATED 341 415 - -
Bma08g00071 461 Gene3D SGNH hydrolase 23 208 IPR036514 -
Bma08g00071 461 Pfam GDSL-like Lipase/Acylhydrolase 35 181 IPR001087 GO:0016788
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00071 Bma-Chr8:885030 Bma01g02439 Bma-Chr1:82017806 2.25E-24 dispersed
Bma08g00071 Bma-Chr8:885030 Bma10g00554 Bma-Chr10:6700803 6.82E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00071 - - qlo:115965875 337.806