Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00076 ATGGAACTGACTGAATCTTTCTTCTTTCTCCCTTTCTGCTTCACCATTTTTGCATTCTTGCTTGCCACCCTTCTTCTGAAATGGTATTGGGCGGCGCCTTCTCCGGCGTTGAAGAACAGAAGCTTACCACCGTCTCCGGCGAAGCTCCCTGTATTAGGAAACCTTCTTCAACTTGGCTCGCAACCACACGAAGCCCTCCAAGCCATGGCTCAAACCCATGGACCTCTAATGCTGCTTCATTTAGGCAGCATCCCCGTCGTGGTGGTCTCGTCGGCGGAGATGGCTCGCGAGGTCATGAAAACGAACGATCTGGTTTTTTCAGATCGACCCAAATCGTCCTTGGCCGATAAGCTTTTATATTATGGTAAAGATGTTGCTTTCGCTCCATATGGAGAGTACTGGAGGCAGATGAAAAGGGTTTGTGTTCTTCATCTTCTGAGCAACAAAATGGTTCACTCTTTTCGCCATGTTAGAGAAGAAGAAACAAGCTTAATGATCAGAAAGATCAAACAATCTTCTTCTTCTTCTGTAAATTTAAGCGACATGTTTATGAAGCTCACAAACGACGTGGTATGCAGAGTGGCTTTAGGCAAGAAATATGGTTTGGAAGAAGATGGGGGTCGTTTCAAGGAGGTTTTGAAAGATTTTGTCAAGTTATTGGGCGTTTTCAGTATTGGAGAGTTCATCCCTTTTCTCGGTTGGTTGGATAAAATCAATGGTTTGGTCGCTAAAACAGAGAAAGTGGCTGAAGAGATAGACAGGTTTCTGGACAGAGTAGTTGAAGAACATGTACAATCCCGAGAGAGGAAAAAGGAAGAAGAAGACGAAGGGAATCACAAGGATTTTGTGGAAGTGTTGCTTGAAATTCAGAGAGAAAACTCAATTGGTCTTCATCTTGATCCTGTTAGCATCAAAGCTATAATTCTGGACATGTTTGCCGCCGGAACTGACACTACCTACACGCTGATGGAGTGGACGATGGCGGAGCTGTTGAGGAATCCAGATATTATGAAGAAACTGCAGAATGAGGTCCGGCGAATAGCCGGAGAAAACCCATTCATAAAGGAGGAAGATTTAGACAAAATGGATTACTTGAGAGCTGTGATCAAGGAAACTCTCCGGCTACACCCTCCGATCCCGTTACTTGTTCCACGGCTATCGACCGACGTCGTTACCATAAAAGGGTTCGAGATTCCGGCCAGAACGCGTGTTATCGTGAATGCGTGGGCGATTGGGAGGGAGGCCGGGATGTGGGAGGATCCGGAGGAGTTCAGGCCGGAGAGATTTGTGAACAGCAGTGTAGATTTCAAGGGGATGGACTTTCAGTTGATCCCATTTGGGGCCGGAAGAAGGGGCTGCCCTGGGATTTCATTTGCTGCCGCCGTCAACGAGCTTGCTTTGGCCAATGTGGTGGGCCTGTTTGACTGGGCATTGCCTGGTGCGGAGAAAGCGGAGAATTTGGGCATGGCTGGATCATCTGGACTAACTATACATAGAAAGTTGCCTCTTCTGGCTGTGCCTACACCGATCTCTTGTGAGTAA 1542 47.15 MELTESFFFLPFCFTIFAFLLATLLLKWYWAAPSPALKNRSLPPSPAKLPVLGNLLQLGSQPHEALQAMAQTHGPLMLLHLGSIPVVVVSSAEMAREVMKTNDLVFSDRPKSSLADKLLYYGKDVAFAPYGEYWRQMKRVCVLHLLSNKMVHSFRHVREEETSLMIRKIKQSSSSSVNLSDMFMKLTNDVVCRVALGKKYGLEEDGGRFKEVLKDFVKLLGVFSIGEFIPFLGWLDKINGLVAKTEKVAEEIDRFLDRVVEEHVQSRERKKEEEDEGNHKDFVEVLLEIQRENSIGLHLDPVSIKAIILDMFAAGTDTTYTLMEWTMAELLRNPDIMKKLQNEVRRIAGENPFIKEEDLDKMDYLRAVIKETLRLHPPIPLLVPRLSTDVVTIKGFEIPARTRVIVNAWAIGREAGMWEDPEEFRPERFVNSSVDFKGMDFQLIPFGAGRRGCPGISFAAAVNELALANVVGLFDWALPGAEKAENLGMAGSSGLTIHRKLPLLAVPTPISCE 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 951011 952632 + Bma027075.1 Bma08g00076 86903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00076 513 Coils Coil 256 276 - -
Bma08g00076 513 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Bma08g00076 513 PANTHER CYTOCHROME P450 71B11-RELATED 12 510 - -
Bma08g00076 513 Pfam Cytochrome P450 43 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 Gene3D Cytochrome P450 36 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma08g00076 513 PANTHER CYTOCHROME P450 71A21-RELATED 12 510 - -
Bma08g00076 513 SUPERFAMILY Cytochrome P450 43 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00076 Bma-Chr8:951011 Bma12g01061 Bma-Chr12:42800238 1.28E-142 dispersed
Bma12g01058 Bma-Chr12:42675774 Bma08g00076 Bma-Chr8:951011 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00076 - - jre:108998521 607.06