Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00085 TCCGACATCATCCTCGTCAGCGACGCGTATTTTGACGCATCGGTCATCAGGCTCAATAACGATTCGAATCAGTACTCTTACGGCCGTGCTTTTTACCCCACGAAGCTGAGGATGATTCCGAATTCGAATTCCTCCTCAATCGGATCGTTTTCCACTTCTTTTGTCTTCTCCATCTTGGCGGAGATCGATTCCAGTCCCGGATTTGGGCTCGCCTTCGTCCTCTCCAATACTACCTCTCCTCCCGGCGCCATAGCCAGCCAGTACTTCGGCCTCTTCACTAATGCTACAATACCATCGGTGGCTCCTCTCCTCGCCGTCGAATTCGATGTCGGCAGGAATCCAGAGTTTAATGATCCTGATAACAATCACATTGGGATCAATCTGAACAGGATTGAATCGGCGAAGGTTCAGACGGCTGGGTATTACGATTCTACCGGAGATTTTGTTACAGTGCGAATGAGAACTGGTCAGAATATTCACGCTTGGATCGATTTCGATGGAGGTAACTTCGAAATTAATGTCACGGTGGCGCCGGTGGGGGTGGTTCGCCCCTCACGACCGTCTTTGAATTTCAGAGATCCGGTTATTGCGAACTACGTCTCGGCCGAGATGTTTGTTGGATTTTCGGCATCGAAAACAACCTGGGTCGAGCCACAGAGAGTTTTAGCGTGGAGTTTGAGCGATTCGGGGACTGCAAGAGAAATCAATCGGACGGACTTTCCTGTTTTTATCCCGGAATCGAGGTCTTCTCTATCCTCCGGCGCAATTGCTGGGATTGTAATTGGTGCCGTAGTGTTTTTGATTATTCTCGCATCCGTGTGGTACTGGTTTTGGCGAAAGAAGAGGTTGAGAGAGGAGGAAGACGATGAAATCGAGGATTGGGAGATGGAATATTGGCCTCATAGATTCTCCTTCGAGGAGCTATCTGAAGCGACGGAGAAATTCTCCGACGACCACCTTCTAGGGTATGGTGGATTTGGTAGAGTGTACAAAGGAACTTTACCCAACAACTCAATAATCGCAGTAAAATGCGTAAACCACGATTCGAAGCAAGGGCTTAAGGAATTCATGGCGGAAATCTCAAGTATGGGGAGATTACAGCACAAAAATTTAGTCCAAATGCGAGGATGGTGCAGAAAGAGGAACCAATTGATGCTCGTTTACGATTTCATGCCCAACGGAAGCCTCAACCGGTGGATATTCGACAAACCGGAGAACCTCCTAGGATGGCGCCACCGCAGGAGAGTCCTGAACGACGTCGCGGAAGGACTGAATTATCTCCACCATGGTTGGGACCAAGTAGTGATTCACAGGGACATAAAATCGAGCAACATTCTTCTCGATTCCGACATGCGAGGCCGGCTCGGAGATTTCGGGCTGGCGAAATTGTACCAGCACGGTGCCGTTCCGAACACCACTCGAATCGTCGGAACTCTAGGGTACTTAGCTCCGGAGGTAGCTACATTGGCGGTGCCGACGGAAGCGAGCGACGTTTTCAGCTTTGGGGTGGTGATCCTGGAGGTGGTTTGCGGACGACGGCCGATAGAAATTGCGGTTGAGGAAGATGAAGTGGTGCTGATAGATTGGGTTAGAGATCTATACGCGAGAGGGAGAGCAATCGAGGCTGTGGATCGGAGAATGGAGGGGGAGTACGAAGCGGCGGAAGTGGAGATGATTTTGAAGCTGGGTTTGACCTGTACTCACCCTGATCCTCAACGGCGGCCGACCATGAACGTAGTCGTCGCCATCTTGATAGGAGAGCAGTCGGTGGCTGCTCCGGCTGTTCTGTTGTCTGATTTGGCACCTCTCGACGGCATCATTACCGCCGCCGCCGCCGCCGTCGCCGTTCACGGTGAGTGCAAAGAGGTGTAA 1872 51.12 SDIILVSDAYFDASVIRLNNDSNQYSYGRAFYPTKLRMIPNSNSSSIGSFSTSFVFSILAEIDSSPGFGLAFVLSNTTSPPGAIASQYFGLFTNATIPSVAPLLAVEFDVGRNPEFNDPDNNHIGINLNRIESAKVQTAGYYDSTGDFVTVRMRTGQNIHAWIDFDGGNFEINVTVAPVGVVRPSRPSLNFRDPVIANYVSAEMFVGFSASKTTWVEPQRVLAWSLSDSGTAREINRTDFPVFIPESRSSLSSGAIAGIVIGAVVFLIILASVWYWFWRKKRLREEEDDEIEDWEMEYWPHRFSFEELSEATEKFSDDHLLGYGGFGRVYKGTLPNNSIIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKRNQLMLVYDFMPNGSLNRWIFDKPENLLGWRHRRRVLNDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSDMRGRLGDFGLAKLYQHGAVPNTTRIVGTLGYLAPEVATLAVPTEASDVFSFGVVILEVVCGRRPIEIAVEEDEVVLIDWVRDLYARGRAIEAVDRRMEGEYEAAEVEMILKLGLTCTHPDPQRRPTMNVVVAILIGEQSVAAPAVLLSDLAPLDGIITAAAAAVAVHGECKEV 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1000536 1002407 + Bma027084.1 Bma08g00085 86912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00085 623 CDD STKc_IRAK 321 584 - -
Bma08g00085 623 SMART serkin_6 315 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00085 623 Gene3D - 1 242 - -
Bma08g00085 623 SUPERFAMILY Protein kinase-like (PK-like) 292 584 IPR011009 -
Bma08g00085 623 ProSiteProfiles Protein kinase domain profile. 315 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00085 623 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Bma08g00085 623 Gene3D Transferase(Phosphotransferase) domain 1 391 595 - -
Bma08g00085 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Bma08g00085 623 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 3 603 - -
Bma08g00085 623 Pfam Legume lectin domain 2 238 IPR001220 GO:0030246
Bma08g00085 623 PANTHER - 3 603 - -
Bma08g00085 623 CDD lectin_legume_LecRK_Arcelin_ConA 1 230 IPR001220 GO:0030246
Bma08g00085 623 Gene3D Phosphorylase Kinase; domain 1 277 390 - -
Bma08g00085 623 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 242 IPR013320 -
Bma08g00085 623 Pfam Protein kinase domain 316 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00085 Bma12g01052 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00085 Bma-Chr8:1000536 Bma10g00280 Bma-Chr10:2521552 1.06E-124 dispersed
Bma12g01052 Bma-Chr12:42625321 Bma08g00085 Bma-Chr8:1000536 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66647 PF00069 Pkinase 3.70E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00085 - - jre:108985873 915.22