Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00100 AAAATGCAGAGCGCGGCTTTCAATTTCTCGCCTTCATTGCCTCTGCTGAAGCCTCGAAGGACTTCGAATCCTATCTCGGCCTCTGGTTTCATCATCGCACGCTCCTCTCCAGCTTTTTCTAGCTCCAACGATCTTAGCTCCTCTGCTGGTGTATCTCTGTCTTCTTCTGCTAGTCCGCTCCGATCCTGGCCTTTGTCCTCGTCTTCTTCCTTCTCTCCTAAATTTAGGCCTTGGTCTGGTGCTCCGTCACTGCGTGATGACTCTGCATTGAGTCGTTTTGAGGCCAGGGCGACCTCGGTGCCGGAGAGTGCTGGAGGGAGCGAGGAATCCAAGAGTTTGTTCAAGACGCTGGAGTTGGGAGCGTTGTTCGGACTCTGGTACCTCTTCAACATATACTTCAACATCTACAATAAGCAGGTACTGAAGGTGTATCCATTCCCCGTTACAGTCACTACAATTCAATTTGCTGTCGGATCTGTGTTTGTTCTTTTTATGTGGAGTTTTAATCTCTATAAGAAGCCTAGAGTTAGTGGCGCACAGCTTGCAGCTTTACTGCCACTGGCAGTTGTTCACACGTTAGGAAACCTTTTCACCAACATGAGTCTCGGTAAAGTGGCTGTATCATTCACTCACACAATCAAAGCTATGGAGCCTTTCTTCTCTGTCATCCTATCTGCAATGTTTCTCGGGGAGAGGCCTACACTATGGGTGGTTGCTTCTCTTTTACCAATTGTTGGTGGTGTGGGATTGGCGTCGGCCACAGAGGCTTCATTCAACTGGTCTGGATTTTGGAGTGCTATGGCTTCCAATTTGACCAATCAATCCCGAAATGTCCTTAGCAAAAAGTTCATGATAAGAAAAGAGGATTCCTTGGACAACATCACTCTCTTTTCGATAATTACAATCATGTCCTTCATTTTGTTAGCTCCCGTTACTCTCTTCATGGAAGGTGTTAAGTTCACTCCTGCCTATCTGCAGTCTGCAGGATTGAATGTTAGTCAATTAGCCACTAGGTCTCTTCTTGCAGCCTTGTGTTTCCATGCTTATCAACAGGTGTCTTATATGATATTGCAAAGGGTATCTCCTGTCACTCACTCTGTCGGAAATTGTGTAAAGCGGGTGGTGGTCATTGTGAGCTCAGTCATCTTCTTCCAAACACCTGTCTCCCCGATCAATTCTCTTGGCACTGGAGTGGCTCTTGCTGGAGTTTTCCTTTATTCAAGGGTGAAACGCATTAAGCCGAAGAGCGCTTAG 1254 46.73 KMQSAAFNFSPSLPLLKPRRTSNPISASGFIIARSSPAFSSSNDLSSSAGVSLSSSASPLRSWPLSSSSSFSPKFRPWSGAPSLRDDSALSRFEARATSVPESAGGSEESKSLFKTLELGALFGLWYLFNIYFNIYNKQVLKVYPFPVTVTTIQFAVGSVFVLFMWSFNLYKKPRVSGAQLAALLPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGERPTLWVVASLLPIVGGVGLASATEASFNWSGFWSAMASNLTNQSRNVLSKKFMIRKEDSLDNITLFSIITIMSFILLAPVTLFMEGVKFTPAYLQSAGLNVSQLATRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSLGTGVALAGVFLYSRVKRIKPKSA 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1212884 1215952 + Bma027100.1 Bma08g00100 86927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00100 417 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 117 416 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bma08g00100 417 Pfam Triose-phosphate Transporter family 118 407 IPR004853 -
Bma08g00100 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 162 252 - -
Bma08g00100 417 MobiDBLite consensus disorder prediction 38 76 - -
Bma08g00100 417 MobiDBLite consensus disorder prediction 1 20 - -
Bma08g00100 417 PANTHER SOLUTE CARRIER FAMILY 35 53 394 - -
Bma08g00100 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 306 411 - -
Bma08g00100 417 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 53 394 - -
Bma08g00100 417 MobiDBLite consensus disorder prediction 38 84 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00217 Bma08g00100 CCT
Bma08g00100 Bma12g01040 CCT
Bma06g00217 Bma08g00100 ECH
Bma08g00100 Bma12g01040 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00100 Bma-Chr8:1212884 Bma14g00350 Bma-Chr14:4300358 9.78E-68 dispersed
Bma06g00217 Bma-Chr6:2577921 Bma08g00100 Bma-Chr8:1212884 0 transposed
Bma14g01489 Bma-Chr14:30114838 Bma08g00100 Bma-Chr8:1212884 1.37E-153 transposed
Bma14g01504 Bma-Chr14:30326275 Bma08g00100 Bma-Chr8:1212884 5.42E-152 transposed
Bma12g01040 Bma-Chr12:42462244 Bma08g00100 Bma-Chr8:1212884 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00100 K15283 - pop:7457744 575.859