Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00107 ATGAATTTTCGGGTCCAATCCCTGAGTTTTTGTTCCAACTCCATCATCCTTGTTCGCCTTAACTTAGCCTCCAACAATTTTTCCGGCGAAATCTCGCCGGGATTTAACAACCTTACACGGCTGAAGACTCTGTTCCTCGAGAATAACCGCTTCACGGGGCCTTTGCCAGAGTTGAAGTCAGTTAAGTTCGACCAGTTCAATGTTTCTAACAATTTGTTGAATGGGTCAGTTCCTACCAGCATGCAGATATATTCTTCGGCTGCTTTCTTGGGTAATTTTCTCTGTGGGAGTCCTCTTGAAGCCTGCTCTGGGAATAGCTCAGAGGCTACAGAAGGGGACATTTCTATCAGTGAAAATAATGGAAGAAACAAAAAGTTGTCTGGCGGTGCCATTGCAGGTATTGTGATTGGATCTGTACTGGGCTTCATTTTGATAGTGATAATTCTTCTGTTTTTATGCTCTAAGAAGAGTAGAAAGACAAGTTCGATTGACATTGCGACTGTAAAGAGCCGGGAAGTAGAAATTCCACTCGAAAAACCAGCTGAAGAGATCGAAAATGGCAGATATGGTAACCAGTATTCAGTTGGAGTAGCAGCTCCTGCTGCCATGGCTGGAAATCGGAAAGGAGAAGCTAATATCAATGTTGGAGGGAAAAAGTTGGTGTTTTTCGGCAATGCAGGGAGGGCATTTGATCTGGAGGATTTGCTGAGAGCTTCAGCAGAAGTTTTGGGTAAAGGAACATTTGGGACTGCTTACAAGGCTGTTTTGGAGATCGGAAGTGTAGTTGCGGTGAAGCGAATGAAGGATGTGATACTTTCAGAGAGAGAATTTAGAGAGAAGATAGAAGTAGTTGGAGCAATGGATCATGAAAACTTGGTACCTCTTAGAGCATATTATTATAGTCTTGATGAGAAGCTTCTTGTTTATGATTACATGCCCATGGGAAGCTTATCTGCACTTTTACATGGGAACAAAGGATCAGGAAGAACTCCATTGACTTGGGAAATGAGGATCAGCATTGCCCTCGGAGTTGCCCGTGGCATCAAATATCTACATTCTCAAAGCCCCAACATTTCCCACGGAAACATAAAATCATCGAACGTCCTCCTCACCAAATCGCATGATGCCCGAGTCTCCGATTTTGGCCTTGCTCATCTTGTCGGCCAGCCATCTACCCCTAATCGTGTTGCCGGCTATCGTGCACCAGAGGTCACCGACCCTCGAAAAGTGTCTCAGAAGGCTGATGTCTATAGCTTTGGCGTCCTTCTCTTGGAACTATTGACCGGTAAAGCTCCAACCCACGCCCTCTTAAACGAGGAAGGGATTGATCTTCCGAGATGGGTCCGATCCGTTGTTCGAGAGGAGTGGACGTCGGAGGTGTTTGATCTCCAGCTTGTCCGATACCAAAATGTGGAGGAAGAAATGGTTCAATTACTGCAATTAGCAGTTGATTGTGCTGACCAATATCCTGATAGAAGACCTTCAATGGCAGCAGTGACAAACCAGATTGAAGAGTTATGTAGAGCAGCAGGCCATGACCAAGAAACTGAAGTCAATGGTGAATAA 1566 44.96 MNFRVQSLSFCSNSIILVRLNLASNNFSGEISPGFNNLTRLKTLFLENNRFTGPLPELKSVKFDQFNVSNNLLNGSVPTSMQIYSSAAFLGNFLCGSPLEACSGNSSEATEGDISISENNGRNKKLSGGAIAGIVIGSVLGFILIVIILLFLCSKKSRKTSSIDIATVKSREVEIPLEKPAEEIENGRYGNQYSVGVAAPAAMAGNRKGEANINVGGKKLVFFGNAGRAFDLEDLLRASAEVLGKGTFGTAYKAVLEIGSVVAVKRMKDVILSEREFREKIEVVGAMDHENLVPLRAYYYSLDEKLLVYDYMPMGSLSALLHGNKGSGRTPLTWEMRISIALGVARGIKYLHSQSPNISHGNIKSSNVLLTKSHDARVSDFGLAHLVGQPSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGIDLPRWVRSVVREEWTSEVFDLQLVRYQNVEEEMVQLLQLAVDCADQYPDRRPSMAAVTNQIEELCRAAGHDQETEVNGE 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1273070 1275202 + Bma027108.1 Bma08g00107 86934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00107 521 SUPERFAMILY L domain-like 8 81 - -
Bma08g00107 521 PANTHER INACTIVE RECEPTOR KINASE-RELATED 15 510 - -
Bma08g00107 521 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524
Bma08g00107 521 Gene3D Ribonuclease Inhibitor 2 111 IPR032675 -
Bma08g00107 521 SUPERFAMILY Protein kinase-like (PK-like) 241 502 IPR011009 -
Bma08g00107 521 Gene3D Phosphorylase Kinase; domain 1 208 311 - -
Bma08g00107 521 PANTHER OS05G0588300 PROTEIN 15 510 - -
Bma08g00107 521 ProSiteProfiles Protein kinase domain profile. 237 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00107 521 Pfam Protein kinase domain 240 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00107 521 Gene3D Transferase(Phosphotransferase) domain 1 312 519 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00926 Bma08g00107 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00926 Bma-Chr3:9604459 Bma08g00107 Bma-Chr8:1273070 0 dispersed
Bma08g00107 Bma-Chr8:1273070 Bma08g01217 Bma-Chr8:51208071 1.45E-141 dispersed
Bma02g00519 Bma-Chr2:10346578 Bma08g00107 Bma-Chr8:1273070 4.45E-144 transposed
Bma12g01282 Bma-Chr12:45808296 Bma08g00107 Bma-Chr8:1273070 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66648 PF00069 Pkinase 8.20E-40 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00107 - - csv:101222458 711.064