Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00108 ATGGTTTTCAAAGGCAGGTTCTTTTCCTCTTCTAGGAAGTCTGATTCTTCTAGTCCAGATGGATCCAATAGTCCTCGATTCCTGGGTTCGAACTCGCCAATCAGATCCGACAAGAAGAAATCGAAATCTGGGACGAAAGAGGATGCTTCTATCTCTGACCCCGGTGCCTTTGGAATCGGCAATTTTGGGGGAGTTGGTTCGAAAGATGGAGCGAAGAAGAAGAATGCAAAGGTCAAAGAGAGTCAACTTCATACTCCCCCGGAAACGACGTTGAAGCCGTCTTCGCTGGTGAGTTCTAGTTCAGCGTACCCAGTGAAGAAGGCGGCGGATGTTAAGGACGGGCCTTCATCAGTGTCGCCTATACTCGCTTCCTCTCTTGGATTGAATAGAATAAAGACGAGATCAGGGCCTTTGCCCCAAGAAAGCTTTTTCGGGTTTAAAAATGATAAGGGACAAGCTCTGGGATCGAGTAATCTTTCGAAGCCTGGTAGCAGTGGGAGCTCCAGTTCTAGCTCTTTGAAAAGTGGGGGAAAGAAGAAAGAAGTGCTAAATCAAAGCAGGATGAGTTCTCAGGAGAATGTTAAACCTTGGATGTATGGTGTAAATAGTTCGGAGAATGTTTCTACTGGGAGTTCTAAATCTAGAGAATTAAGTCCAAATCTACCAGCACACCCACGGCGTCAGAGCCGCGAATCAACATCCGAAGCAGGTATGAAAAGTGAATCATGCGGGTATTCAGGAGGCTTAAGAAGTTCAGAAGTTTGTACGCCTGAGACTACATATGATTGTGAAAATCCAAAGGAGTCCGAATCTCCTCGCTTTCAAGCCATACTTCGTGTTACTAGTGCTCCTAGAAGGAAGTATCCTGCAGATATAAAAAGTTTCTCCCATGAACTAAACTCCAAAGGAGTAAGACCTTTCCCATTTTGGAAGCCGAGAGGCTTGAATAACTTAGAGGAAATATTAGTTGTCATACGAGCGAAATTTGACAAAGCAAAGGAAGAAGTGAACTCTGATCTGGCTGTTTTTGCAGCAGATCTGGTTGGTACTCTTGAAAAAGATGCAGATAGTCATCCTGAGTGGCAAGAAACAATTGAGGACTTGCTTGTTTTAGCTCGAAGCTGTGCCATGACCTCAGCTGCTGAGTTTTGGCTCCAATGTGAAGGCATTGTTCAGGAATTGGATGATAGGCGTCAAGAACTCCCTGGAGGTAAGCTGAAGCAACTTCATACTCGAATGCTTTTCATACTCACAAGATGCACGAGGTTGTTACAGTTTCACAAGGAGAGTGGGTTGGCTGAGGATGAAAATGTCTTCCAGCTTCACCCATCTAGAATACTCAATTCTGCGGATAAAAGAGGTCCTTCAGGAATGACAATGGATTTAAAAAGTAGTACTGCTGTTAAGAGCACAAAAGTAGTTTCAGTTAGGAAATCTTACAGCCAGGAGCAGCATGGATTAGATTGGAGTCAAGCACATGATAATCAGACGGGAAATTTTGTGTCACCCTCTGTGGATAATAGTTCAAAGAAGTTGGTGTCTCCTTCCAGCAGGGACAGGATGGCTTCTTGGAAAAAACTTCCTTCTCCGGCCGTAAAAGTTGTTAAAGAAGCAGCACCTACAAAAGATGAGAATGATATCAGGGAAAAACCGACAAAGATCACAAACAATAATAGTGTAGTGTCTGAAGTTGACATGTCTGGCTTTAAGGGAACAAACAATAATAGTGTAGTGTCTGAAGTTGACATGTCTGGTTTTAAGGGGACGGAGGCCCTCCCTGCCAAAGATTTCCATGAACAGACTGTTAAGCACCAACACAAGGCTTCTTGGGGTTACTGGGGGGACCAGCCAACTGTTTTTGACGAAAGTTCAATAATTTGTCGTATTTGTGAGGAGGAGGTTCCGACATCACATGTGGAAGATCATTTAAGAATTTGTGCAATTGTTGATCGATGTGATCAGAAGGGTCTAAGTGTGAATGACCGTCTTATAAGAATTGCTGAAACCCTAGAAAAGATGATGGAGTCCTTTACACAAAAGGATAACCACCATGTAGAAAGTCCAGATGTTGCAAAAGTGTTGAATTCAAGTGTTACTGAAGAATCTGATGGTCTTTCTCCAAAACTTAGTGATTCGTCTCGTCGAGGCTCAGAGGATATGCTTGACTGTTTCCATGAAACAGATAATTCTGTCTTTATGGATGACTTAAAGGGTTTGCCTTCAATGACATGTAAAACTCGTTTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCAGCAGGTAGTATGACTCCTCGGTCTCCAATAGTGACTCCAAGAACCAGTCAGATGGATTTGTTCTTGGCCGGAAAGTGTGCTTACTCTGAGCAGGATGATCACCCGCAGATGAACGAACTTGCTGATATTGCAAGATGTGTTGCGAATCCTTCTTTGGATGATGAGAACTCCATGCATTATTTACTATCCTGTCTTGAAGACTTGAGGGTTGTCATTGACCGGAGGAAGTTTGATGCACAAACTGTTGAGACCTTTGGCACACGCATTGAGAAGCTGATTCGGGAGAAGTATTTGCAACTTTGTGAGCTTGTTGATGATGAGAAAGTTGATATAACTAGTACTGTTATTGATGAAGATACACCTTTGGAAGATGATGTGGTTCGTAGCTTGAGAACAAGTCCCGTGCATTCTTCCAAGGACCGAACTTCAATTGATGACTTTGAGATTATAAAACCAATCAGCAGAGGGGCATTTGGTAGGGTGTTTCTTGCCAAAAAGAGAACAACTGGAGATCTCTTTGCAATAAAGATTTTGAAGAAGGCCGATATGATTCGTAAGAATGCTGTTGAAAGCATATTAGCAGAACGTGATATTTTAATTTCTGTCCGCAACCCATTTGTGGTGCGCTTCTTCTATTCTTTTACATGCCGTGAGAACTTGTATCTTGTCATGGAATACTTGAATGGAGGAGATCTCTACTCGTTGTTGAGAAATTTAGGTTGCTTGCATGAAGATGTGGCACGTGTGTATATAGCTGAAGTTGTACTTGCTTTGGAATATTTGCATTCTCTTCGTGTAGTTCATCGAGATTTGAAGCCTGATAATTTGCTAATTGCACATGATGGTCATATTAAGATACTCCATGTCTATTTTCAGTTGACAGATTTTGGGCTTTCAAAGGTTGGTCTTATCAACAGCACCGATGACTTGTCAGGACCTGCAGTTAGTGAGACATCTCTCCGTGTAGAGGACGAACCTTCAGTATCTATGTCTGAAGATCAGAAAGAGAGGAGGAAGAAACGGTCCGCTGTGGGAACACCAGACTATTTGGCCCCGGAAATATTATTGGGAACTGGACATGGTACCACTGCGGACTGGTGGTCTGTGGGTACAATATTTGATAATATTCTCAATTGTCAAATACCTTGGCCTCGGGTACCTGATGAAATGAGCCAAGAAGCACACGATTTAATTGATCGATTATTGACAGAGGATCCTCATCAGAGACTTGGAGCCAGAGGAGCTTCTGAGGTGAAGCAACATATGTTCTTTAAGGATATCAACTGGGATACGTTAGCAAGGCAAAAGGCTGCATTTGTTCCATCCTCAGAAAGTGCTCTAGATACTAGTTACTTCACAAGTCGATACTCGTGGAGTCACTCAAATGATAATGTCTATCCTTCAAGTGAACTTGAGGATTCCAGTGATGCTGATAGCTTAAGTGGCAGTAGTGGTTTTAGCAATCGGCAAGATGAAGTGGGAGATGAATGTGGTGGTCTCACTGAATTTGAGCCTGGCTCCTCTGTCAATTACTCTTTCAGTAATTTCTCATTTAAGAACCTCTCTCAGCTTGCATCGATCAACTACGACTTGCTCTCTAAAGGTTGGAAGGATGATCCACCCAATCCTAATGCATAA 3918 42.78 MVFKGRFFSSSRKSDSSSPDGSNSPRFLGSNSPIRSDKKKSKSGTKEDASISDPGAFGIGNFGGVGSKDGAKKKNAKVKESQLHTPPETTLKPSSLVSSSSAYPVKKAADVKDGPSSVSPILASSLGLNRIKTRSGPLPQESFFGFKNDKGQALGSSNLSKPGSSGSSSSSSLKSGGKKKEVLNQSRMSSQENVKPWMYGVNSSENVSTGSSKSRELSPNLPAHPRRQSRESTSEAGMKSESCGYSGGLRSSEVCTPETTYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPFWKPRGLNNLEEILVVIRAKFDKAKEEVNSDLAVFAADLVGTLEKDADSHPEWQETIEDLLVLARSCAMTSAAEFWLQCEGIVQELDDRRQELPGGKLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLHPSRILNSADKRGPSGMTMDLKSSTAVKSTKVVSVRKSYSQEQHGLDWSQAHDNQTGNFVSPSVDNSSKKLVSPSSRDRMASWKKLPSPAVKVVKEAAPTKDENDIREKPTKITNNNSVVSEVDMSGFKGTNNNSVVSEVDMSGFKGTEALPAKDFHEQTVKHQHKASWGYWGDQPTVFDESSIICRICEEEVPTSHVEDHLRICAIVDRCDQKGLSVNDRLIRIAETLEKMMESFTQKDNHHVESPDVAKVLNSSVTEESDGLSPKLSDSSRRGSEDMLDCFHETDNSVFMDDLKGLPSMTCKTRFGPKSDQGMTTSSAGSMTPRSPIVTPRTSQMDLFLAGKCAYSEQDDHPQMNELADIARCVANPSLDDENSMHYLLSCLEDLRVVIDRRKFDAQTVETFGTRIEKLIREKYLQLCELVDDEKVDITSTVIDEDTPLEDDVVRSLRTSPVHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKILKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLHEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKILHVYFQLTDFGLSKVGLINSTDDLSGPAVSETSLRVEDEPSVSMSEDQKERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGTIFDNILNCQIPWPRVPDEMSQEAHDLIDRLLTEDPHQRLGARGASEVKQHMFFKDINWDTLARQKAAFVPSSESALDTSYFTSRYSWSHSNDNVYPSSELEDSSDADSLSGSSGFSNRQDEVGDECGGLTEFEPGSSVNYSFSNFSFKNLSQLASINYDLLSKGWKDDPPNPNA 1305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1284572 1303752 - Bma027109.1 Bma08g00108 86935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00108 1305 MobiDBLite consensus disorder prediction 1227 1261 - -
Bma08g00108 1305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1026 1038 IPR008271 GO:0004672|GO:0006468
Bma08g00108 1305 MobiDBLite consensus disorder prediction 82 102 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 9 31 - -
Bma08g00108 1305 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 23 1305 - -
Bma08g00108 1305 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 1305 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 151 218 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 33 47 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 484 516 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 745 772 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 1227 1250 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 697 717 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 484 523 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 1069 1103 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 747 772 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 697 711 - -
Bma08g00108 1305 ProSiteProfiles AGC-kinase C-terminal domain profile. 1185 1288 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma08g00108 1305 Coils Coil 660 680 - -
Bma08g00108 1305 SUPERFAMILY Protein kinase-like (PK-like) 892 1219 IPR011009 -
Bma08g00108 1305 ProSiteProfiles Protein kinase domain profile. 907 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00108 1305 MobiDBLite consensus disorder prediction 235 250 - -
Bma08g00108 1305 Gene3D Phosphorylase Kinase; domain 1 904 1217 - -
Bma08g00108 1305 Coils Coil 315 335 - -
Bma08g00108 1305 Pfam Protein kinase domain 907 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00108 1305 Gene3D Transferase(Phosphotransferase) domain 1 987 1201 - -
Bma08g00108 1305 SMART serkin_6 907 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00108 1305 MobiDBLite consensus disorder prediction 1 250 - -
Bma08g00108 1305 MobiDBLite consensus disorder prediction 1086 1103 - -
Bma08g00108 1305 CDD STKc_MAST_like 913 1189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00108 Bma-Chr8:1284572 Bma08g00364 Bma-Chr8:7534625 1.83E-146 dispersed
Bma10g00360 Bma-Chr10:3382980 Bma08g00108 Bma-Chr8:1284572 1.64E-59 dispersed
Bma08g00108 Bma-Chr8:1284572 Bma09g00765 Bma-Chr9:46175670 2.76E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66649 PF00069 Pkinase 3.70E-53 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00108 - - csv:101214945 1785.39