Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00120 | ATGATGAGGAAGAAGAGAGGTGAGGGTGAGAGCTCGGAGGCTCAGGAAGCAAGTGGTGGTGGAAGCCGAGGTGGTCCTCTGCGGCAAGGCGAAAGGGGTCCTCAACAGCAACAAGGAGGAAGAGGTTGGGGTCCTCAAGGTGGTCGAGGAGTCCCCCATGGAGGCCGAGGCCGTGGAATGCCTCAACCGCAACAGCATTATGAATATCAACCAAGAGGCAGGGGAGGACCACCTCCGCAGGGTGGTGGTCGTGGCGGCCATGGTGGAGGATTGCCTCCTTCAGGTGGGCCGTCCAGACCACCTGTTTCCGAGCTGCACCAAGCTTCCTTGGCTCCATATCAAGTTGGGGTGACTCAGCCCACACCAGGTGCGGGTAGTTCTTCTGCTCATCTGCCTGAAGCATCACAGATTGAGCAACAGTTTGAGCAGTTATCCGTTCATCAGGAAGCTGCTTCTAGTCAATCAATGCAGCCAATGCCACCCTCCAGCAAATCAATGAGGTTCCCACTTCGTCCTGGAAAGGGCAGCACTGGTAAAAGGTGCATTGTGAGGGCTAATCACTTTTTTGTCGAACTTCCTGACAAAGATCTGCATCAGTATGATGTTACAATTACCCCACAGCTGACTTCACGAGGTGTTAGTCGTGCTGTAATGAATCAGTTAGTGAGATCTTACAGGGAGTCTCACCTTGGTAAGAGGCTTCCTGCCTATGATGGTAGGAAAAGTCTGTATACTGCAGGCCCTCTTCCATTTCTATCAAAGGAATTTAAAATCACTCTCTTGGATGAAGATGATGGATCAGGCTCTCAAAGGAGGGAGAGGGAATTTAAGGTTGTGATCAAATTTGCTACACAACCTGACCTGCATCGTTTGGGGCTCTTTTTGGAAGGCAGACAGGCAGATGCTCCTCAGGAAGCCCTTCAGGTGCTGGACATTGTCCTCCGCGAACAGCCTACCTCTAGATATTGTCCGGTTGCGCGATCATTTTATGCGCCTGGTCTGGGAAGGCGTCAGCCGCTTGGCGAGGGATTGGAAAGTTGGCGTGGCTTTTATCAAAGTATTCGACCAACACAAATGGGACTGACTCTGAATATTGATATGTCTTCTACCGCTTTTTTTGAGCCATTGCCAGTCATTGACTTTGTTACTAAACTTCTTAATCGAGATGTGTCATCTCGGACACTGTCCGATGCTGATCGTGTGAAGATAAAGAAAGCTTTACGAGGAGTCAAGGTTGAAGTCACACATCGAGGTAACATGCGAAGAAGGTATCGTATTTCTGGTCTAACATCGCAGGCGACGAGCGAACTAACTTTCCCTGTTGATGAGATGGGTACAATGAAATCTGTTGTTGAGTATTTTTACGAAACCTATGGTTTCGTTATTCAACATACTCAATGGCCTTGTCTACAAGTTGGAAACCAGCAGAGACCTAATTATTTACCAATGGAGGTATGCAAGATTGTTGAGGGACAGAGGTACTCAAAGAGACTGAACAAGAAACAGATATCAGAATTGTTGAAAGTCAACTGCCAGCGTCCTCATGAAAGGGAGCAAAATATAATGCAGACTGTTAGGCATAACGCATATCATAATGATCCGTATGCAAAGGAGTTTGGGATTAAGATCAGTGAACAGCTTGCTTCTGTTGAAGCCCGTATCCTCCCTGCGCCTTGGCTCAAATACCATGACACTGGAAGGGAAAAAGATTGTTTGCCACAAGTGGGGCAATGGAACATGATGAATAAGAAAATGGTTAATGGTGGTACAGTTAACAACTGGATGTGCATTAATTTTTCTCGTTATGTACAAGACAATGTTGCCCAAAGATTCTGCAGTGAACTCGCTCAAATGTGTAATATATCTGGAATGGCTTACAATCCAGATCCGGTACTTCCCATACTTAGTGCTCGTCCTGATCAAGTGGAGAAGGTTCTTAAAACCCGGTATCATGATGCAATGACAAAACGTCAGCCACCATGCAAAGAACTTGATTTGCTTATTGTTATTCTTCCAGATGATAATGGGTCCCTATATGGTGATTTGAAGCGAATTTGTGAGACTGATCTTGGTCTTGTTTCACAATGCTGTTTGACAAAGAATGTGGCCAAAATGACTAAACAATATTTAGCTAATGTGGCTCTGAAGATTAATGTGAAAGTTGGGGGAAGGAATACCGTACTTGTTGATGCTGTTTTAAGGCAAATTCCTTTGGTTAGCGATGTTCCTACTATCATTTTTGGTGCTGATGTTACTCATCCTCCTCCAGGGGAGGATTCTAGCCCATCCATTGCTGCTGTTGTGGCTTCCCAAGATTGGCCTGAAGTTACCAAGTATGCTGGTTTGGTTTCTGCCCAGGCACACAGACAAGAGCTCATTCAAGACCTGTTTAAACAGTGGCAAGATCCAGTCAGAGGAGCAGGATCTGGAGGAATGATCAAGGAACTCCTCATATCGTTCCGAAGAGCTACTGGACATAAACCTCAACGAATAATCTTTTACAGGGATGGAGTGAGCGAGGGACAGTTCTATCAGGTTTTGCTGCATGAACTTGACGCCATTAGGAAGGCTTGTAATTCTTTGGAACCCAATTATCAGCCTCGAGTTACATTTGTTGTAGTTCAGAAGCGGCACCACACTCGATTATTTACTAACAACCATCGTGACTACAATACAGTTGACCGGAGTGGCAACATATTACCTGGTACGGTCGTGGACACAAAGATTTGTCATCCTACTGAATTTGACTTCTACCTATGCAGCCACGCAGGAATACAGGGTACTAGCCGCCCAGCTCACTACCACGTTCTATGGGATGAGAATGAGTTCACAGCTGATGGGTTGCAATCCCTAACCAATAACCTTTGCTACACTTATGCTAGGTGTACACGATCTGTATCCATTGTTCCCCCTGCATACTATGCCCATCTTGCTGCATTTAGAGCTCGATTCTACATGGAGCCAGACACGTCAGATAGCGGGTCAATGACGAGTGGAGCTGCAGCTGGACGTGGTGGCGCTCGTAGCTCTCACCCATCGGTGGCATCGGCAGTGAGACCTTTGCCTGCGCTGAAGGAGAATGTTAAACGAGTTATGTTTTACTGCTAA | 3108 | 46.49 | MMRKKRGEGESSEAQEASGGGSRGGPLRQGERGPQQQQGGRGWGPQGGRGVPHGGRGRGMPQPQQHYEYQPRGRGGPPPQGGGRGGHGGGLPPSGGPSRPPVSELHQASLAPYQVGVTQPTPGAGSSSAHLPEASQIEQQFEQLSVHQEAASSQSMQPMPPSSKSMRFPLRPGKGSTGKRCIVRANHFFVELPDKDLHQYDVTITPQLTSRGVSRAVMNQLVRSYRESHLGKRLPAYDGRKSLYTAGPLPFLSKEFKITLLDEDDGSGSQRREREFKVVIKFATQPDLHRLGLFLEGRQADAPQEALQVLDIVLREQPTSRYCPVARSFYAPGLGRRQPLGEGLESWRGFYQSIRPTQMGLTLNIDMSSTAFFEPLPVIDFVTKLLNRDVSSRTLSDADRVKIKKALRGVKVEVTHRGNMRRRYRISGLTSQATSELTFPVDEMGTMKSVVEYFYETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNKKQISELLKVNCQRPHEREQNIMQTVRHNAYHNDPYAKEFGIKISEQLASVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWMCINFSRYVQDNVAQRFCSELAQMCNISGMAYNPDPVLPILSARPDQVEKVLKTRYHDAMTKRQPPCKELDLLIVILPDDNGSLYGDLKRICETDLGLVSQCCLTKNVAKMTKQYLANVALKINVKVGGRNTVLVDAVLRQIPLVSDVPTIIFGADVTHPPPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKQWQDPVRGAGSGGMIKELLISFRRATGHKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACNSLEPNYQPRVTFVVVQKRHHTRLFTNNHRDYNTVDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENEFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMTSGAAAGRGGARSSHPSVASAVRPLPALKENVKRVMFYC | 1035 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1483433 | 1490684 | + | Bma027124.1 | Bma08g00120 | 86947 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00120 | 1035 | SMART | Piwi_a_2 | 666 | 987 | IPR003165 | GO:0003676 | |
Bma08g00120 | 1035 | Gene3D | paz domain | 369 | 494 | - | - | |
Bma08g00120 | 1035 | SUPERFAMILY | PAZ domain | 370 | 530 | IPR036085 | GO:0005515 | |
Bma08g00120 | 1035 | ProSiteProfiles | PAZ domain profile. | 376 | 490 | IPR003100 | GO:0005515 | |
Bma08g00120 | 1035 | MobiDBLite | consensus disorder prediction | 995 | 1014 | - | - | |
Bma08g00120 | 1035 | Pfam | Argonaute linker 1 domain | 325 | 373 | IPR014811 | - | |
Bma08g00120 | 1035 | MobiDBLite | consensus disorder prediction | 143 | 162 | - | - | |
Bma08g00120 | 1035 | Pfam | PAZ domain | 380 | 506 | IPR003100 | GO:0005515 | |
Bma08g00120 | 1035 | SMART | PAZ_2_a_3 | 380 | 512 | IPR003100 | GO:0005515 | |
Bma08g00120 | 1035 | Gene3D | - | 554 | 729 | - | - | |
Bma08g00120 | 1035 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 68 | 1034 | - | - | |
Bma08g00120 | 1035 | MobiDBLite | consensus disorder prediction | 1 | 104 | - | - | |
Bma08g00120 | 1035 | Pfam | Glycine-rich region of argonaut | 66 | 161 | IPR024357 | - | |
Bma08g00120 | 1035 | Pfam | Mid domain of argonaute | 573 | 648 | IPR032473 | - | |
Bma08g00120 | 1035 | MobiDBLite | consensus disorder prediction | 143 | 176 | - | - | |
Bma08g00120 | 1035 | CDD | Piwi_ago-like | 534 | 986 | IPR045246 | - | |
Bma08g00120 | 1035 | SUPERFAMILY | Ribonuclease H-like | 662 | 988 | IPR012337 | - | |
Bma08g00120 | 1035 | Pfam | Argonaute linker 2 domain | 516 | 562 | IPR032472 | - | |
Bma08g00120 | 1035 | CDD | PAZ_argonaute_like | 375 | 489 | - | - | |
Bma08g00120 | 1035 | Gene3D | - | 735 | 1035 | IPR036397 | GO:0003676 | |
Bma08g00120 | 1035 | Pfam | N-terminal domain of argonaute | 179 | 314 | IPR032474 | - | |
Bma08g00120 | 1035 | PANTHER | PROTEIN ARGONAUTE 1A | 68 | 1034 | - | - | |
Bma08g00120 | 1035 | SMART | DUF1785_2 | 323 | 375 | IPR014811 | - | |
Bma08g00120 | 1035 | ProSiteProfiles | Piwi domain profile. | 666 | 987 | IPR003165 | GO:0003676 | |
Bma08g00120 | 1035 | Pfam | Piwi domain | 667 | 986 | IPR003165 | GO:0003676 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00821 | Bma-Chr2:44708823 | Bma08g00120 | Bma-Chr8:1483433 | 0 | dispersed | |
Bma06g01574 | Bma-Chr6:52016946 | Bma08g00120 | Bma-Chr8:1483433 | 0 | dispersed | |
Bma07g00301 | Bma-Chr7:3717719 | Bma08g00120 | Bma-Chr8:1483433 | 3.36E-160 | dispersed | |
Bma08g00120 | Bma-Chr8:1483433 | Bma11g00328 | Bma-Chr11:3073852 | 4.48E-157 | dispersed | |
Bma14g00429 | Bma-Chr14:5006971 | Bma08g00120 | Bma-Chr8:1483433 | 0 | transposed | |
Bma14g00876 | Bma-Chr14:9884168 | Bma08g00120 | Bma-Chr8:1483433 | 6.65E-113 | transposed | |
Bma15g00144 | Bma-Chr15:1501899 | Bma08g00120 | Bma-Chr8:1483433 | 0 | transposed | |
Bma12g01262 | Bma-Chr12:45660405 | Bma08g00120 | Bma-Chr8:1483433 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00120 | K11593 | - | zju:107419730 | 1618.98 |