Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00181 ATGTCGCAGGCGAGAAATCCTGATGAAGAGAAGGCTCGACCAGAGGGAAGTTGTCCTGATGACAACCACAGAGGGGTTCCGGCCATAAAAAATGTGGTGCTGGACTTCATGCGTTTGCATTCTGTTCAACATTTGCTGGAGCCAATAATTCGTAAAGTGGTAAGGGAAGAAGTTGAATTGGCACTGAGAAAGCATTTGACCAGCATGAAAGAGAATAAGGAGAATACTGTAAAGGCCATGCATTTGTCTGAGTCCCAATGCTTGAAGCTACAGTTCACCAACAACCTGTCTCTTCCAGTATTTACTGGAGCTCGAATCGAAGGGGTTGATGGATCTTCCTTGAAAGTTACTATGGTTAATGCTATTAGTGGGAAATATGTCACCTCTGGTCCTGAATCGTCGGCCAAGGTGGAAATTGTAGTTCTCGAGGGTGATTTTGATGGTGAAGATGGTGATAATTGGACGAGTGAAGAGTTTAAAAATAATGTCATCAAAGAAAGAGAAGGAAAGAAACCAATTCTCACTGGAGATGTATTTCTGAATCTGAAAGACGGTGTTGGTTCAATTAGTGACATTTCTTTCACGGATAATTCTAGCTGGACAAGGAGCCGAAGATTTAGATTAGGTGCCAGAGTTGTAGATAGTGTTGATGGAATTAGTGTAAGAGAAGCGAAGTCAGAATCCTTTGTCGTGAGGGACCATCGGGGTGAATTGTACAAGAAGCACCATCCTCCTCTTCTGATTGATGAAGTATGGAGACTTGAAAAAATCGGCAAAGATGGAGCTTTTCACAGGAGATTGTGCAGGGAAAACATAGTTACCGTCAAGGATTTCCTAACCCTTCTCTTCCTTGACCCTCAAAGGCTTCGAAATATCCTTGGAACCGGCATGTCTGCCAAGATGTGGGACACAACTGTTGAGCATGCTAGGACATGTGTAATTGATAAGAAGAAATACTTGTACAGAGGTGTAGTTTTTAACGTGGTTGGCCAAGCGTTGGGATTATTTTCAGATTGCCAGTATGTTCCAGTGGATAAGCTGTCGGAAAATGAGAAGATTGATGCAACAATCTTAGTTCTGTCCGCATTTGAACACTGGGGAGAAGTAGTTTCTATTGGAGATGAAGTTCTTCCGGAAGCCGAGTCTTCTCAGTTAGTAAGTGGTGTCTGCAGCTCTAGCTCACCCACCATGGAAGGTTGCAGTGGGAGTATCATTTTGCCTACTCATCCTCAAACAGATGGTGGGTTTGACTATGCCCAACCAAGCGCCTTTTCTCCTGAAATTACCTTGCCAATGTGTTCGGTTGGGATAGGCAGTGGCTTGGATGATTATATTCTTCAGAATATCGATGAAATGGGTCTCAGGTTTTACCAAACTTCAAATTTCCCCAACCTAGTTGATTCCTTGATAGGGGATTCTGAGCCCTTGAATCAAATTTTCTATCCAGATGATCATATGCAGTTTTTTGAACCCGATCTTCGACACAACTTCAACTTTAAATCACAGGCCGAAAATTCTCAACTTGTGGAGAAAATGCATCCGTGGCAGCGTGCTAAGATTAGATGGACGAAGCTATTTAGTGTGCTCAAATGGTTTTCAATCCGGAGAATGGTATCAAAGAGGCCCCAGCTTCCAGGGAACAAGCGACACCGAGTGGAGTTACATGAAGTTGATTAA 1677 43.17 MSQARNPDEEKARPEGSCPDDNHRGVPAIKNVVLDFMRLHSVQHLLEPIIRKVVREEVELALRKHLTSMKENKENTVKAMHLSESQCLKLQFTNNLSLPVFTGARIEGVDGSSLKVTMVNAISGKYVTSGPESSAKVEIVVLEGDFDGEDGDNWTSEEFKNNVIKEREGKKPILTGDVFLNLKDGVGSISDISFTDNSSWTRSRRFRLGARVVDSVDGISVREAKSESFVVRDHRGELYKKHHPPLLIDEVWRLEKIGKDGAFHRRLCRENIVTVKDFLTLLFLDPQRLRNILGTGMSAKMWDTTVEHARTCVIDKKKYLYRGVVFNVVGQALGLFSDCQYVPVDKLSENEKIDATILVLSAFEHWGEVVSIGDEVLPEAESSQLVSGVCSSSSPTMEGCSGSIILPTHPQTDGGFDYAQPSAFSPEITLPMCSVGIGSGLDDYILQNIDEMGLRFYQTSNFPNLVDSLIGDSEPLNQIFYPDDHMQFFEPDLRHNFNFKSQAENSQLVEKMHPWQRAKIRWTKLFSVLKWFSIRRMVSKRPQLPGNKRHRVELHEVD 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2216093 2219397 - Bma027182.2 Bma08g00181 87008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00181 558 MobiDBLite consensus disorder prediction 1 24 - -
Bma08g00181 558 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 541 - -
Bma08g00181 558 Pfam Calmodulin binding protein central domain 247 312 IPR046830 -
Bma08g00181 558 MobiDBLite consensus disorder prediction 1 20 - -
Bma08g00181 558 Pfam Calmodulin binding protein C-terminal domain 319 371 IPR046829 -
Bma08g00181 558 Pfam Calmodulin binding protein-like N-terminal domain 88 234 IPR046831 -
Bma08g00181 558 PANTHER OS02G0177800 PROTEIN 1 541 IPR012416 GO:0005516
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00202 Bma08g00181 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00059 Bma-Chr6:937160 Bma08g00181 Bma-Chr8:2216093 5.62E-10 dispersed
Bma06g00202 Bma-Chr6:2450332 Bma08g00181 Bma-Chr8:2216093 5.77E-25 dispersed
Bma06g00919 Bma-Chr6:44421668 Bma08g00181 Bma-Chr8:2216093 1.37E-119 dispersed
Bma08g00181 Bma-Chr8:2216093 Bma14g01314 Bma-Chr14:24022786 8.55E-87 dispersed
Bma08g00181 Bma-Chr8:2216093 Bma01g00367 Bma-Chr1:3032505 8.48E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00181 - - jre:108981063 657.136