Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00182 ATGGCCGGTCCATCAACTCTCGTAGTTGTCCTCCTCTTCTTCTTCTTCTCCGCCGTCCCTTTTCGCGCCGAATCAAAACTCACCCTCGATTATTACGCGAAAACTTGCCCTGATTTTGCAAGAGTTGTACGCGAAACCGTCACCTCGAAGCAAATCACCACCCCCACCACCGCCGCAGGAACGCTCCGCCTCTTCTTCCATGACTGCATGGTCGGCGGCTGCGATGCGTCGGCCCTCATTTCTTCCAACTTATTTAATAAAGCCGAAAGAGACTCCGACAGCAACCTCTCTCTCCCTGGCGACTCCTTCGATGTCATCGTCCGAGCTAAAACCACCCTCGAGCTCACCTGCCCCGGCATCGTCTCATGCTCCGACATTCTGGCGCAGTCCACCCGCGACCTCGTCACCATGGTCGGCGGTCCATTTTACAAAGTTCGGCTAGGTCGGAAGGATGGATTGGTTTCTCAGGCCACCAGAGTCGAGTCAAATCTCCCCCACACTGACCAAACTGTAGACAGCCTGATAAAATACTTCGCTGCGAAAGGGTTCACCATCAGAGAATTCGTAGCTCTCTCCGGTGCCCACACCATCGGGTTCTCCCACTGCAAAGAATTCTCCAATCGGTTATTCCGTTACAGCAAAACCGCGAAAACCGATCCCTCAATGCACCCGAAGTTCTCCGGAGCGTTGAAGACAATGTGCGCAAACTACACCGTCGACCCTGAGATGTCGGCTTTTAACGACGTAATGACGCCGGGAAAATTTGACAACATGTACTACCAGAATTTGTTAAAAGGGTTAGGTCTCTTAGCCTCCGATCAAGCTCTGACGAAAGACCCGAGGACGAGGCAGATCGTGGAGGTCTACGCGGCGGATCAGGCGGCGTTCTTTAAAGACTTCTCACAGGTAATGGAAAAGCTTAGTGTCTACGGCGTCAAAACTGGCCGGAAAGGAGAAGTGAGGCGGAGGTGCGACCAGTTCAATAGAATCCAGACTTGA 999 52.85 MAGPSTLVVVLLFFFFSAVPFRAESKLTLDYYAKTCPDFARVVRETVTSKQITTPTTAAGTLRLFFHDCMVGGCDASALISSNLFNKAERDSDSNLSLPGDSFDVIVRAKTTLELTCPGIVSCSDILAQSTRDLVTMVGGPFYKVRLGRKDGLVSQATRVESNLPHTDQTVDSLIKYFAAKGFTIREFVALSGAHTIGFSHCKEFSNRLFRYSKTAKTDPSMHPKFSGALKTMCANYTVDPEMSAFNDVMTPGKFDNMYYQNLLKGLGLLASDQALTKDPRTRQIVEVYAADQAAFFKDFSQVMEKLSVYGVKTGRKGEVRRRCDQFNRIQT 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2227738 2228736 + Bma027183.1 Bma08g00182 87009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00182 332 Gene3D Peroxidase, domain 2 165 307 - -
Bma08g00182 332 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PANTHER - 7 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Bma08g00182 332 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Bma08g00182 332 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 Gene3D - 30 328 - -
Bma08g00182 332 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma08g00182 332 PANTHER PEROXIDASE 41 7 332 - -
Bma08g00182 332 Pfam Peroxidase 46 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01699 Bma-Chr4:53246172 Bma08g00182 Bma-Chr8:2227738 0 dispersed
Bma08g00182 Bma-Chr8:2227738 Bma13g00585 Bma-Chr13:12757631 1.49E-92 dispersed
Bma11g00146 Bma-Chr11:1311771 Bma08g00182 Bma-Chr8:2227738 1.02E-14 dispersed
Bma08g00182 Bma-Chr8:2227738 Bma01g00558 Bma-Chr1:4896111 2.81E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00182 K00430 - zju:107423571 475.707