Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00185 ATGGCGATTCCGATACCCAGTAGACAGCTATTCATCGACGGAGAATGGAGAGAACCAGTTCTTAAGAAACGCATCCCCATCATCAATCCTGCCACTGAAGAAATCATCGGTATCTCTCTCTCTCTCTCTGCCTGTCTTTTTCTGGTTAAATTATTGAGTTTGATAAGTCAGTCTATGATTTGTGCTTTAGGGGATATTCCTGCAGCAACTGCAGAGGATGTAGAGCTAGCTGTTAGTGCAGCCAGGAGAGCCCTTGCCAAAAACCAAGGGGGTGTATGGGCCTCTTCTTCTGGAGCTGTTCGCTCAAAGTATTTACGCTCCATCGCTGCCAAGGTAGTGGAGAAGAAATCTGAACTAGCAAAGCTCGAAGCAATTGATTGTGGAAAACCTCTGGATGAAGCTGCCTGGGATATGGATGATGTAGCCGGGTGTTTTGAGTACTATGCAGACCTTGCTGAACGTTTGGATGCCAAGCAAAAGGCACCACTTTCCCTTCCTATGGATTCATTCAAAAGCTATGTTCTCAAGGAACCCATTGGAGTGGTTGGGTTGATTACTCCATGGAACTATCCTCTACTGATGGCCACATGGAAAGTGGCTCCTGCATTGGCTGCTGGATGTGCTGCAATTCTCAAGCCATCGGAATTGGCTTCTGTGACTTGTTTGGAACTGGCTGAAATATGTAACAGTATCGGCCTTCCTCGTGGCGTTCTCAATGTTTTAACTGGATACGGTCCTGAAGCCGGTGCTCCTTTGGCTTCGCATCCGCACGTTGACAAGATTGCATTTACAGGAAGCACCTCTACAGGGAGCAAGATTATGTCTGCTGCAGCTCAAGTGGTCAAGCCTGTTACACTGGAGCTTGGTGGAAAGAGTCCGATTCTTGTTTTTGAGGACGTTGACTTGGATAAAGCTGCCGAATGGACTGCCTTCGGTTGCTTTTGGACAAATGGTCAGATTTGTAGTGCCACTTCCCGTCTTCTTGTACAAGAAAGCATAGCCAATGATTTTTTGGACAAGCTGGTACAATGGTGCAGAAATATTAAAATATCAGATCCTCTGGAAGATGGTTGTCGGCTTGGTCCTGTTGTTAGTGAAGGACAGTATGAGAAAGTATTGAAGTTCATCTCAACTGCGGAGAGCGAAGGTGCAACTATTTTATCGGGTGGGGGTCGTCCTGAGCATCTCAAAAAAGGATTCTTCATTGAACCGACCATCATAAATGGTGTGACGACATCTATGCAAATTTGGAGAGAAGAAGTTTTCGGGCCCGTAATTTGTGTCAAAACGTTTAAAACTGAAGACGAAGCAATTGAATTAGCTAATGATAGCCATTATGGGTTAGGTTCGGCTGTGATCTCGAATGACTTAGAAAGGTGTGAGCGGATTTCGAAGGCTTTGCAGGCAGGAATTGTGTGGATCAATTGCTCGCAACCGTGTTTCTGTCAAGCCCCGTGGGGAGGCACCAAGCGCAGTGGTTTTGGTCGTGAATTAGGCGAATGGGGACTGGATAATTATGTGAGCGTGAAGCAGGTAACTCAGTATGTGTCCAGTGAGCCATGGGGATGGTATCAGTCTCCTTCGTCTTCAAAACTCTGA 1599 46.28 MAIPIPSRQLFIDGEWREPVLKKRIPIINPATEEIIGISLSLSACLFLVKLLSLISQSMICALGDIPAATAEDVELAVSAARRALAKNQGGVWASSSGAVRSKYLRSIAAKVVEKKSELAKLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAERLDAKQKAPLSLPMDSFKSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELAEICNSIGLPRGVLNVLTGYGPEAGAPLASHPHVDKIAFTGSTSTGSKIMSAAAQVVKPVTLELGGKSPILVFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLVQESIANDFLDKLVQWCRNIKISDPLEDGCRLGPVVSEGQYEKVLKFISTAESEGATILSGGGRPEHLKKGFFIEPTIINGVTTSMQIWREEVFGPVICVKTFKTEDEAIELANDSHYGLGSAVISNDLERCERISKALQAGIVWINCSQPCFCQAPWGGTKRSGFGRELGEWGLDNYVSVKQVTQYVSSEPWGWYQSPSSSKL 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2251663 2256497 + Bma027187.2 Bma08g00185 87012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00185 532 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 1 37 - -
Bma08g00185 532 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 60 527 - -
Bma08g00185 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 510 IPR016162 GO:0016491
Bma08g00185 532 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 314 325 IPR016160 GO:0016491
Bma08g00185 532 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 286 293 IPR029510 GO:0016491
Bma08g00185 532 CDD ALDH_F10_BADH 27 514 - -
Bma08g00185 532 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 60 527 - -
Bma08g00185 532 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 37 - -
Bma08g00185 532 Pfam Aldehyde dehydrogenase family 63 512 IPR015590 GO:0016491
Bma08g00185 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 294 485 IPR016163 GO:0016620
Bma08g00185 532 SUPERFAMILY ALDH-like 6 514 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00185 Bma-Chr8:2251663 Bma11g00506 Bma-Chr11:6312388 3.82E-118 dispersed
Bma12g01022 Bma-Chr12:42322685 Bma08g00185 Bma-Chr8:2251663 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00185 K00130 - jre:108999250 883.248