Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma08g00185 | ATGGCGATTCCGATACCCAGTAGACAGCTATTCATCGACGGAGAATGGAGAGAACCAGTTCTTAAGAAACGCATCCCCATCATCAATCCTGCCACTGAAGAAATCATCGGTATCTCTCTCTCTCTCTCTGCCTGTCTTTTTCTGGTTAAATTATTGAGTTTGATAAGTCAGTCTATGATTTGTGCTTTAGGGGATATTCCTGCAGCAACTGCAGAGGATGTAGAGCTAGCTGTTAGTGCAGCCAGGAGAGCCCTTGCCAAAAACCAAGGGGGTGTATGGGCCTCTTCTTCTGGAGCTGTTCGCTCAAAGTATTTACGCTCCATCGCTGCCAAGGTAGTGGAGAAGAAATCTGAACTAGCAAAGCTCGAAGCAATTGATTGTGGAAAACCTCTGGATGAAGCTGCCTGGGATATGGATGATGTAGCCGGGTGTTTTGAGTACTATGCAGACCTTGCTGAACGTTTGGATGCCAAGCAAAAGGCACCACTTTCCCTTCCTATGGATTCATTCAAAAGCTATGTTCTCAAGGAACCCATTGGAGTGGTTGGGTTGATTACTCCATGGAACTATCCTCTACTGATGGCCACATGGAAAGTGGCTCCTGCATTGGCTGCTGGATGTGCTGCAATTCTCAAGCCATCGGAATTGGCTTCTGTGACTTGTTTGGAACTGGCTGAAATATGTAACAGTATCGGCCTTCCTCGTGGCGTTCTCAATGTTTTAACTGGATACGGTCCTGAAGCCGGTGCTCCTTTGGCTTCGCATCCGCACGTTGACAAGATTGCATTTACAGGAAGCACCTCTACAGGGAGCAAGATTATGTCTGCTGCAGCTCAAGTGGTCAAGCCTGTTACACTGGAGCTTGGTGGAAAGAGTCCGATTCTTGTTTTTGAGGACGTTGACTTGGATAAAGCTGCCGAATGGACTGCCTTCGGTTGCTTTTGGACAAATGGTCAGATTTGTAGTGCCACTTCCCGTCTTCTTGTACAAGAAAGCATAGCCAATGATTTTTTGGACAAGCTGGTACAATGGTGCAGAAATATTAAAATATCAGATCCTCTGGAAGATGGTTGTCGGCTTGGTCCTGTTGTTAGTGAAGGACAGTATGAGAAAGTATTGAAGTTCATCTCAACTGCGGAGAGCGAAGGTGCAACTATTTTATCGGGTGGGGGTCGTCCTGAGCATCTCAAAAAAGGATTCTTCATTGAACCGACCATCATAAATGGTGTGACGACATCTATGCAAATTTGGAGAGAAGAAGTTTTCGGGCCCGTAATTTGTGTCAAAACGTTTAAAACTGAAGACGAAGCAATTGAATTAGCTAATGATAGCCATTATGGGTTAGGTTCGGCTGTGATCTCGAATGACTTAGAAAGGTGTGAGCGGATTTCGAAGGCTTTGCAGGCAGGAATTGTGTGGATCAATTGCTCGCAACCGTGTTTCTGTCAAGCCCCGTGGGGAGGCACCAAGCGCAGTGGTTTTGGTCGTGAATTAGGCGAATGGGGACTGGATAATTATGTGAGCGTGAAGCAGGTAACTCAGTATGTGTCCAGTGAGCCATGGGGATGGTATCAGTCTCCTTCGTCTTCAAAACTCTGA | 1599 | 46.28 | MAIPIPSRQLFIDGEWREPVLKKRIPIINPATEEIIGISLSLSACLFLVKLLSLISQSMICALGDIPAATAEDVELAVSAARRALAKNQGGVWASSSGAVRSKYLRSIAAKVVEKKSELAKLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAERLDAKQKAPLSLPMDSFKSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELAEICNSIGLPRGVLNVLTGYGPEAGAPLASHPHVDKIAFTGSTSTGSKIMSAAAQVVKPVTLELGGKSPILVFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLVQESIANDFLDKLVQWCRNIKISDPLEDGCRLGPVVSEGQYEKVLKFISTAESEGATILSGGGRPEHLKKGFFIEPTIINGVTTSMQIWREEVFGPVICVKTFKTEDEAIELANDSHYGLGSAVISNDLERCERISKALQAGIVWINCSQPCFCQAPWGGTKRSGFGRELGEWGLDNYVSVKQVTQYVSSEPWGWYQSPSSSKL | 532 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2251663 | 2256497 | + | Bma027187.2 | Bma08g00185 | 87012 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma08g00185 | 532 | PANTHER | BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC | 1 | 37 | - | - | |
Bma08g00185 | 532 | PANTHER | BETAINE ALDEHYDE DEHYDROGENASE | 60 | 527 | - | - | |
Bma08g00185 | 532 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 63 | 510 | IPR016162 | GO:0016491 | |
Bma08g00185 | 532 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 314 | 325 | IPR016160 | GO:0016491 | |
Bma08g00185 | 532 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 286 | 293 | IPR029510 | GO:0016491 | |
Bma08g00185 | 532 | CDD | ALDH_F10_BADH | 27 | 514 | - | - | |
Bma08g00185 | 532 | PANTHER | BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC | 60 | 527 | - | - | |
Bma08g00185 | 532 | PANTHER | BETAINE ALDEHYDE DEHYDROGENASE | 1 | 37 | - | - | |
Bma08g00185 | 532 | Pfam | Aldehyde dehydrogenase family | 63 | 512 | IPR015590 | GO:0016491 | |
Bma08g00185 | 532 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 294 | 485 | IPR016163 | GO:0016620 | |
Bma08g00185 | 532 | SUPERFAMILY | ALDH-like | 6 | 514 | IPR016161 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00185 | Bma-Chr8:2251663 | Bma11g00506 | Bma-Chr11:6312388 | 3.82E-118 | dispersed | |
Bma12g01022 | Bma-Chr12:42322685 | Bma08g00185 | Bma-Chr8:2251663 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma08g00185 | K00130 | - | jre:108999250 | 883.248 |