Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00193 ATGGTGTCTTCCTCTTCTCAGAAGAAAACCTTCCATTCTCTCCTCGTTTCCAACCTCACAAAGCTTACTATCCCTTCTTCTTCTTCTTCCTCGTCCATCACACACCAAGACTTCGAGTTTTCCGACCTTTTTGGCCCTCCCGTCTCCTCCCCATCCGCTTCCTCCTCATTCCAGAGAGATCCACTACAACCTCAGCTGCAAGTAATTCATAATCGATCTCATTCCTTTGTCGGTCCCTCTCCTCGTTTCGCTCCTTCCTCGTCACTCCCCTTTCACCAGGAACTTGATTCGCAGAGTGAGGAGGAAGACGGTGAAGAAGCAGATGATGAAATTCCAGTTATTAATGGAGCTCTAAATGATGTAGTGGGTAAGATTGGGCCTGCCGATTTTGAGATTCTTAGAGTTGTCGGTAAGGGTGCGTTTGGAAAGGTCTTTCTGGTGAAGAAGACGGTGGACGATAGAGGAGATAGTGATGGGATTTACGCAATGAAAGTGATGAGAAAGGACACTATTATAAAGAAGAATCATGTCGATTATATGAAGGCAGAGAGAGACATTCTTACCAAAGTTTTGCATCCCTTCATTGTTCAGCTCCGCTACTCTTTCCAGACCAAAGCAAAGCTCTATTTGATTCTCGATTTCATAAATGGAGGACATCTCTTCTTTCATCTCTACCGACAGGGCCTTTTCAGTGAGGACCAGGCAAGGATTTATACTGCAGAGATTGTATCTGCTGTTTCACATCTGCACAGTTGTGGAATTGTGCATCGGGATCTCAAGCCTGAAAATATTCTAGTCGATTCAGACGGGCATGTTATGCTAACAGATTTTGGGCTTGCCAAGGAAATCGATGAATCAAGCAGGTCAAATTCATTGTGCGGAACGACAGAGTACATGGCTCCCGAAATTTTGCTGAATAAAGGGCACAACAAAGATGCTGATTGGTGGAGTGTCGGGATACTCTTATATGAAATGCTTTCTGGGCAGCCTCCATTTACACATTCAAATAGGAAGAAGCTTCAAGAGAAAATTATCAAAGACAAAGTGAAACTTCCACCCTATCTCAGCAGTGAAGCACACTCTTTACTTAAAGGACTACTTCAAAAGGAACCGTCGAAAAGATTAGGAAGTGGGTCAAATGGAGCAGATAAGATAAAAAGTCATAAATGGTTTCAACCAATCAACTGGAAGAAATTGGAGGCCAGAGAAATGCACCCGAAGTTCAAGCCCGATGTAACCGGGAAAGACTGTACAGCCAATTTCGACCGCTGCTGGACGGTAATGCCTCCGAATGACTCACCAGCTCCAACACCAACTTCAGGTGAACATTTCCAGGGATATACTTATGTTGCTCCTAATCCTTGGCTTTCTCCATCGGGGGGTAATACTTCTTCTAACTTCCCAAAAAGTCCTAGCAAATTTGATGGGTAA 1431 44.1 MVSSSSQKKTFHSLLVSNLTKLTIPSSSSSSSITHQDFEFSDLFGPPVSSPSASSSFQRDPLQPQLQVIHNRSHSFVGPSPRFAPSSSLPFHQELDSQSEEEDGEEADDEIPVINGALNDVVGKIGPADFEILRVVGKGAFGKVFLVKKTVDDRGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVLHPFIVQLRYSFQTKAKLYLILDFINGGHLFFHLYRQGLFSEDQARIYTAEIVSAVSHLHSCGIVHRDLKPENILVDSDGHVMLTDFGLAKEIDESSRSNSLCGTTEYMAPEILLNKGHNKDADWWSVGILLYEMLSGQPPFTHSNRKKLQEKIIKDKVKLPPYLSSEAHSLLKGLLQKEPSKRLGSGSNGADKIKSHKWFQPINWKKLEAREMHPKFKPDVTGKDCTANFDRCWTVMPPNDSPAPTPTSGEHFQGYTYVAPNPWLSPSGGNTSSNFPKSPSKFDG 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2310372 2313320 - Bma027196.1 Bma08g00193 87020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00193 476 MobiDBLite consensus disorder prediction 87 108 - -
Bma08g00193 476 ProSiteProfiles Protein kinase domain profile. 130 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00193 476 SUPERFAMILY Protein kinase-like (PK-like) 129 466 IPR011009 -
Bma08g00193 476 Pfam Protein kinase domain 130 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00193 476 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 457 - -
Bma08g00193 476 Pfam Protein kinase C terminal domain 412 449 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bma08g00193 476 SMART pkinase_C_6 392 451 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma08g00193 476 MobiDBLite consensus disorder prediction 47 63 - -
Bma08g00193 476 SMART serkin_6 130 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma08g00193 476 ProSitePatterns Protein kinases ATP-binding region signature. 136 164 IPR017441 GO:0005524
Bma08g00193 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bma08g00193 476 Gene3D Phosphorylase Kinase; domain 1 128 433 - -
Bma08g00193 476 PANTHER RIBOSOMAL PROTEIN S6 KINASE 6 457 - -
Bma08g00193 476 ProSiteProfiles AGC-kinase C-terminal domain profile. 392 459 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma08g00193 476 MobiDBLite consensus disorder prediction 44 63 - -
Bma08g00193 476 Gene3D Transferase(Phosphotransferase) domain 1 215 410 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00193 Bma10g01094 CCT
Bma08g00193 Bma14g01945 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00193 Bma-Chr8:2310372 Bma10g00360 Bma-Chr10:3382980 3.43E-170 dispersed
Bma09g00765 Bma-Chr9:46175670 Bma08g00193 Bma-Chr8:2310372 6.49E-61 dispersed
Bma08g00193 Bma-Chr8:2310372 Bma15g00522 Bma-Chr15:6002312 3.19E-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66653 PF00069 Pkinase 7.00E-74 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00193 K04688 - csv:101214867 686.411