Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma08g00203 ATGACAATCTTGTACTTTTATTTTACAAGCCTTTTTTTTTTCTTACATAAAAACTACCTTTTTTCCCTCCTTTTCTTCCTTCTACTATTTGGGAGGGGCCTCCAGTTTTTGCCACAGGACAGGGTTTGTGAGTTTGCAAAACTGACTCCTGTGCAACTTCTAGAAGAGACTGAAAAAGCTATTGGCGATACTCAACTTCCAGGTCAACATCGTGCGCTTGTTGAAAAAAGCCGTGAAATAAAGAATATAGAGCGGGCTGTGGAAAAAAATGGGGACACATTGAATCAGTTGAAGGCACTAAATGCTGAGCTAGAGAAGGATGTTGAGCGTGTTCGTCAAAGGGAAATACTTCTAGCAAAGGCTGAGTCCATGAAAAAGAAATTGCCGTGGCTTAAGTATGATATAAAGAAGGTTGAATATATAGAATTGAAGGATAAGGAGAATGATGCCAAAAAGAAGTTGGATGAAGCAGCAACGACATTAAATGGTCTCAAAGAACCCATTGAGAAACATAAAAAGGAGAAAGCAGTGGTGGATGCTAAAAGCAAAAAAATTAGCAATATCATGAATAATAATACGAGGAAACGAATTGAGCTTTTAGATAATGAAAACCATTTGGGGGTAGAAGTACAAGGCAAGTACAAAGAAATGGGAGATTTGAGGAAGCAAGAAGAGTCTCGGCAACAAAGAATTATACAAGCTAAGGAGGAACTTGTTGCAGCTGAACTAGAGCTTCAAAATTTGCGTCCCTATTGTGTTCCAAGGGAGGATATTGAAAGATTAGCTAGTCAAATAATGGATCTTGAACTTTCTGCAAATCAAAAGAGGTTGTCTAAGACAGAGAGCGAAAAAGTCTTAGCTCAAAAAAGGATAGCCTTGAGACAGTGCTTAGACAGGTTAAAGGATATGGAAAGCAAACATACTAAACTTTTGCAGGCATTGGAAAATTCTGGAGCTGATAAGATTTCTGATGCTTACCACTGGTTGCAAGAACATCGCCATGATTTCAACAAGGAGGTTTATGGTCCAATTTTGCTTGAGGTTAATGTTTCTAATCAGATTCATGCTGACTACTTGGAAAGCCAAACCCCTTATTACATCTGGAAGTCTTTTGTAACTCAAGATTCTAATGATCGTGACCTTTTGGTCAAAAGTTTCAAATCATTTGATGTTCCCATTTTGAATTACGTGGATGATGAGGGTCGTCGAAAAGAAAAATTTGAAATTACTGAGGAGATGCGCAAACTTGGCATCTATTCTAGGCTCGACCAAGTTTTTGATGCTCCCAACTCTGTGAAGGAAGTTTTGATCAGTCAGTTTGGTTTGGATCGCTCATATATTGGTTCTAAGGAGACTGATCAGAAGGCAGATGCAGTTTCAAAATATGGAATTTTAGATTTTTGGACTCCAGAAAATCACTATCACTGGTCTGTATCCAGATACGGTGACCATATGACTGGAAATGTGGAACCAGTGGAGCGCTCCCGTCTTCTTCTGTGCAATAAGGATGTGGGTGAAATTGATGGTTTGAGATCGAGGAAAAGTGAACTGGAAGAATCTGTCGCAGCTTTAGAAGAAAGCCATAAGTCTTTTCAGATTGAGATAAGAAACATAGAAAATGAAACAGCTAAACTTCGTAAACAACGGGAGGACATTATCAGCATTGTGCACCAGGAGAAGAGGAAGCGTCGGGAAATGGAAAATCGTATCAATCAAAGGAAAAAGAAACTAGAATCCATGACACAAGAGGAAGACTTGGAGACTTGCATAGCAAAGCTTAATGATCAAGCTGCAGGTATATCTATTCAACGGTTCCGATGTGCAATAGAGATTAAGAATCTACTTGTAGACACTGTATCCCACAGACGAAGTTTTGCTCAACATCATTTGTCATCAATTGAATTTGATGCTAAGATTAGAGACATGGAATTCAATATGAAGAAACAGGAGAAGGATGCTATGCAAGCATCATTGCACTTAGAGAATTGTAAGAAGGAAGTAGAGGATTGTAGACAGCAACTGTCAGTTGCTAAGAGGCATGCGGAATCAATTGCTGTGATCACTCCTGAACTTAAAAAGGATTTTCTTGAGATGCCAACTACAATCGAAGAATTGGAGACCGCAATTCAAGACAATATTTCTCAAGCTAATTCTATTCTATTCTTGAACCACAACATATTAGAGGAGTATGAACATAGACAGAGTCAGATAAGAAGCATTGCAACAAAACTTGAAACTGATCAAGAGGAGCTGAAAAGGCGGGTCACTGAAGTTGATGATCTCAAGAAAAATTGGCTTCCTACTTTAAGAAACCTTGTTACTCAGATTAATGAGACCTTCAGTCGCAACTTCCAAGAGATGGCTGTTGCTGGAGAAGTCTCGTTGGATGAGCATGGCATGGACTTCGATAAATTTGGAATTCTTATAAAAGTAAAGTTCAGACAATCAGGACTGCTTCAGGTTCTCAGTGCTCACCATCAGTCTGGCGGGGAACGCTCAGTTTCAACAATTCTTTATCTTGTATCTCTTCAAGACCTTACCAAATGCCCGTTTAGGGTGGTTGATGAGATAAATCAAGGAATGGATCCAATTAATGAAAGGAAGATGTTCCAGCAGTTGGTGAGAGCTGCTAGCCAACCAAATACACCACAGTGTTTTTTATTGACCCCAAAGTTACTACCAGATTTAGTATATAGTGAAGCTTGCAGTATCTTGAATATCATGAACGGTCCCTGGATTGAGCATCCCTCCAAAGTGTGGAGTAGTGGAGACTGCTGGGCAACGGTCACGGGGTTGGTTGGAGAAAGTAAATCTTGA 2817 39.47 MTILYFYFTSLFFFLHKNYLFSLLFFLLLFGRGLQFLPQDRVCEFAKLTPVQLLEETEKAIGDTQLPGQHRALVEKSREIKNIERAVEKNGDTLNQLKALNAELEKDVERVRQREILLAKAESMKKKLPWLKYDIKKVEYIELKDKENDAKKKLDEAATTLNGLKEPIEKHKKEKAVVDAKSKKISNIMNNNTRKRIELLDNENHLGVEVQGKYKEMGDLRKQEESRQQRIIQAKEELVAAELELQNLRPYCVPREDIERLASQIMDLELSANQKRLSKTESEKVLAQKRIALRQCLDRLKDMESKHTKLLQALENSGADKISDAYHWLQEHRHDFNKEVYGPILLEVNVSNQIHADYLESQTPYYIWKSFVTQDSNDRDLLVKSFKSFDVPILNYVDDEGRRKEKFEITEEMRKLGIYSRLDQVFDAPNSVKEVLISQFGLDRSYIGSKETDQKADAVSKYGILDFWTPENHYHWSVSRYGDHMTGNVEPVERSRLLLCNKDVGEIDGLRSRKSELEESVAALEESHKSFQIEIRNIENETAKLRKQREDIISIVHQEKRKRREMENRINQRKKKLESMTQEEDLETCIAKLNDQAAGISIQRFRCAIEIKNLLVDTVSHRRSFAQHHLSSIEFDAKIRDMEFNMKKQEKDAMQASLHLENCKKEVEDCRQQLSVAKRHAESIAVITPELKKDFLEMPTTIEELETAIQDNISQANSILFLNHNILEEYEHRQSQIRSIATKLETDQEELKRRVTEVDDLKKNWLPTLRNLVTQINETFSRNFQEMAVAGEVSLDEHGMDFDKFGILIKVKFRQSGLLQVLSAHHQSGGERSVSTILYLVSLQDLTKCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLVYSEACSILNIMNGPWIEHPSKVWSSGDCWATVTGLVGESKS 938
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2428464 2445641 + Bma027208.1 Bma08g00203 87030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma08g00203 938 Coils Coil 83 114 - -
Bma08g00203 938 CDD ABC_SMC5_euk 811 913 - -
Bma08g00203 938 Gene3D - 732 910 IPR027417 -
Bma08g00203 938 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 35 935 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Bma08g00203 938 Coils Coil 646 680 - -
Bma08g00203 938 Coils Coil 140 160 - -
Bma08g00203 938 Coils Coil 744 764 - -
Bma08g00203 938 Coils Coil 507 548 - -
Bma08g00203 938 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 889 IPR027417 -
Bma08g00203 938 Coils Coil 556 583 - -
Bma08g00203 938 Coils Coil 286 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00203 Bma-Chr8:2428464 Bma10g01137 Bma-Chr10:38470123 3.72E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma08g00203 K22803 - vvi:100249983 1332.01